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arvados-tutorial.git
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Add splitDir to take Directory input
[arvados-tutorial.git]
/
WGS-processing
/
2021-12-07
Ward Vandewege
Merge branch 'blog-examples'
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commitdiff
2021-10-26
Peter Amstutz
Lower RAM request by bwa to run on 9tee4
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commitdiff
2021-10-26
Peter Amstutz
Bugfix .bai secondary file for ApplyBSQR behavior
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commitdiff
2021-01-14
Jiayong Li
Merge branch '17049-make-singlechrom'
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commitdiff
2021-01-14
Jiayong Li
Add comments on the chr19 only yml
17049-make-singlechrom
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commitdiff
2020-12-28
Jiayong Li
Add chr19 yml by changing fullintervallist
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commitdiff
2020-08-13
Sarah Wait Zaranek
updating yml
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commitdiff
2020-07-27
Sarah Wait Zaranek
Updating yml for 2 vcfs of known sites
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commitdiff
2020-07-27
Sarah Wait Zaranek
Fixing labels for knownsites
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commitdiff
2020-07-27
Sarah Wait Zaranek
Updating to allow for two vcfs of known sites
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commitdiff
2020-07-23
Sarah Wait Zaranek
Updating cwl and yml for intervals and other changes
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commitdiff
2020-07-14
Sarah Wait Zaranek
Updating HTML edam comments
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commitdiff
2020-07-12
Sarah Wait Zaranek
Updating comments
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commitdiff
2020-07-12
Sarah Wait Zaranek
Fixing edam reference
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commitdiff
2020-07-10
Sarah Wait Zaranek
Moving #
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commitdiff
2020-07-07
Sarah Wait Zaranek
Updating docker reference
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commitdiff
2020-07-07
Sarah Wait Zaranek
Updating bwa-samtools dockerfile
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commitdiff
2020-07-07
Sarah Wait Zaranek
Adding more formats to yml
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commitdiff
2020-07-07
Sarah Wait Zaranek
Updating yml for formats
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commitdiff
2020-07-03
Sarah Wait Zaranek
Removing initial work dir requirement when not needed
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commitdiff
2020-07-03
Sarah Wait Zaranek
Updating yml files
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commitdiff
2020-07-03
Sarah Wait Zaranek
Updating yml files
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commitdiff
2020-07-02
Sarah Wait Zaranek
Removing white spaces and commenting out schemas
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commitdiff
2020-07-02
Sarah Wait Zaranek
Removing white space and commenting out schemas
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commitdiff
2020-07-02
Sarah Wait Zaranek
Moving fastqc into not in use for docker containers
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commitdiff
2020-07-02
Sarah Wait Zaranek
Removing white spaces and commenting schemas
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commitdiff
2020-07-02
Sarah Wait Zaranek
Updating for new Docker containter
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commitdiff
2020-07-01
Sarah Wait Zaranek
Adding links about CWL to the readme
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commitdiff
2020-07-01
Sarah Wait Zaranek
Switching variable knownsites1 to knownsites in yml...
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commitdiff
2020-07-01
Sarah Wait Zaranek
Switching variable knownsites1 to knownsites
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commitdiff
2020-07-01
Sarah Wait Zaranek
Updating report generation code
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commitdiff
2020-07-01
Sarah Wait Zaranek
Updating yml to include intervals
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commitdiff
2020-07-01
Sarah Wait Zaranek
Adding metatdata and labels
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commitdiff
2020-07-01
Sarah Wait Zaranek
Adding metadata, updating variables
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commitdiff
2020-07-01
Sarah Wait Zaranek
Adding metadata
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commitdiff
2020-07-01
Sarah Wait Zaranek
Adding metadata and step renaming
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commitdiff
2020-07-01
Sarah Wait Zaranek
updating metadata
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commitdiff
2020-06-29
Sarah Wait Zaranek
updating for metadata and yml to check command line cwl
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commitdiff
2020-06-26
Sarah Wait Zaranek
Adding labels and metadata
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commitdiff
2020-06-26
Sarah Wait Zaranek
Adding arv to namespace
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commitdiff
2020-06-26
Sarah Wait Zaranek
Adding labels and other metadata
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commitdiff
2020-06-25
Sarah Wait Zaranek
removing swp file
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commitdiff
2020-06-25
Sarah Wait Zaranek
Adding labels and metadata
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commitdiff
2020-06-25
Sarah Wait Zaranek
Updating labels and metadata
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commitdiff
2020-06-25
Sarah Wait Zaranek
Even more formatting
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commitdiff
2020-06-25
Sarah Wait Zaranek
Fixing formating issue
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commitdiff
2020-06-25
Sarah Wait Zaranek
Adding Arvados info to readme
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commitdiff
2020-06-25
Sarah Wait Zaranek
reorg of yml files
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commitdiff
2020-06-25
Sarah Wait Zaranek
Updataing readme and yml files
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commitdiff
2020-06-25
Sarah Wait Zaranek
Updating labels
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commitdiff
2020-06-25
Sarah Wait Zaranek
Adding more labels
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commitdiff
2020-06-24
Sarah Wait Zaranek
Adding more labels/metadata
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commitdiff
2020-06-24
Sarah Wait Zaranek
Adding labels and other annotations
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commitdiff
2020-06-24
Sarah Wait Zaranek
Updating labels and hints on cwl
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commitdiff
2020-06-24
Sarah Wait Zaranek
Adding labels
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commitdiff
2020-06-24
Sarah Wait Zaranek
Adding labels and formats to cwl
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commitdiff
2020-06-23
Sarah Wait Zaranek
Updating main cwl workflow
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commitdiff
2020-06-23
Sarah Wait Zaranek
Adding license info to cwl
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commitdiff
2020-06-23
Sarah Wait Zaranek
Adding changes to Dockerfiles
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commitdiff
2020-06-23
Sarah Wait Zaranek
Updating docker file for fastqc
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commitdiff
2020-06-23
Sarah Wait Zaranek
Updating clinvar report docker file and reorganizing...
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commitdiff
2020-06-19
Sarah Wait Zaranek
Updating readme
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commitdiff
2020-06-19
Sarah Wait Zaranek
Moving license location
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commitdiff
2020-06-19
Sarah Wait Zaranek
Adding license and licenseignore
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commitdiff
2020-06-19
Sarah Wait Zaranek
Updating readme
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commitdiff
2020-06-19
Sarah Wait Zaranek
Moving readme to markdown
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commitdiff
2020-06-18
Sarah Wait Zaranek
Updating not-in-use directory
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commitdiff
2020-06-18
Sarah Wait Zaranek
Updating dockerfiles
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commitdiff
2020-06-18
Sarah Wait Zaranek
removing un-needed yml
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commitdiff
2020-06-18
Sarah Wait Zaranek
cleaning up src files
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commitdiff
2020-06-18
Sarah Wait Zaranek
Updating readme and reorganization
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commitdiff
2020-06-18
Sarah Wait Zaranek
Updating links to "helper" cwl
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commitdiff
2020-06-18
Sarah Wait Zaranek
Add scatter wf for overall scatter
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commitdiff
2020-06-18
Sarah Wait Zaranek
Adding readme and clean up
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commitdiff
2020-06-18
Sarah Wait Zaranek
Rearranging for clarity
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