git.arvados.org - arvados-tutorial.git/commit

author	Sarah Wait Zaranek <swz@curii.com>
	Tue, 7 Jul 2020 00:36:13 +0000 (00:36 +0000)
committer	Sarah Wait Zaranek <swz@curii.com>
	Tue, 7 Jul 2020 00:36:13 +0000 (00:36 +0000)
commit	5080fcfd4a95af83c57b7a386b7ae9e0d38ef7c5
tree	d2205185f33f3537bd0fdc3b24b12be8542acc90	tree \| snapshot
parent	48f2b200216c57788577d45e080ab6bae212f90b	commit \| diff

Updating yml for formats
Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #

19 files changed:

WGS-processing/cwl/helper/annotate-vcf.cwl		diff \| blob \| history
WGS-processing/cwl/helper/bwamem-gatk-report-wf.cwl		diff \| blob \| history
WGS-processing/cwl/helper/gather-array-vcf.cwl	[new file with mode: 0644]	blob
WGS-processing/cwl/helper/gather-vcf.cwl		diff \| blob \| history
WGS-processing/cwl/helper/gatk-wf-with-interval.cwl		diff \| blob \| history
WGS-processing/cwl/helper/gvcf-to-vcf.cwl		diff \| blob \| history
WGS-processing/cwl/helper/scatter-gatk-wf-with-interval.cwl		diff \| blob \| history
WGS-processing/cwl/wgs-processing-wf.cwl		diff \| blob \| history
WGS-processing/yml/helper/annotate-vcf.yml		diff \| blob \| history
WGS-processing/yml/helper/bwamem-gatk-report-wf.yml		diff \| blob \| history
WGS-processing/yml/helper/fastqc.yml		diff \| blob \| history
WGS-processing/yml/helper/gatk-applyBQSR-with-interval.yml		diff \| blob \| history
WGS-processing/yml/helper/gatk-haplotypecaller-with-interval.yml		diff \| blob \| history
WGS-processing/yml/helper/gatk-selectvariants.yml		diff \| blob \| history
WGS-processing/yml/helper/gatk-splitintervals.yml		diff \| blob \| history
WGS-processing/yml/helper/gatk-wf-with-interval.yml		diff \| blob \| history
WGS-processing/yml/helper/gvcf-to-vcf.yml		diff \| blob \| history
WGS-processing/yml/helper/mark-duplicates.yml		diff \| blob \| history
WGS-processing/yml/helper/samtools-index.yml		diff \| blob \| history