+++ /dev/null
-sample: WGC071838D
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-fastq1:
- class: File
- location: keep:su92l-4zz18-9wi0scyveespepp/WGC071838D_R1.fastq.gz
-fastq2:
- class: File
- location: keep:su92l-4zz18-9wi0scyveespepp/WGC071838D_R2.fastq.gz
-
+++ /dev/null
-sample: WGC074701D
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-fastq1:
- class: File
- location: keep:su92l-4zz18-bpfmvsf9wedbefr/WGC074701D_R1.fastq.gz
-fastq2:
- class: File
- location: keep:su92l-4zz18-bpfmvsf9wedbefr/WGC074701D_R1.fastq.gz
-
+++ /dev/null
-sample: hu297A5D_AE2CH6SK4DG
-
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-
-fastq1:
- class: File
- location: keep:fafa02df612fe883b6d7bdc0bc755afb+612/hu297A5D_AE2CH6SK4DG-EXT_R1.fastq.gz
-
-fastq2:
- class: File
- location: keep:fafa02df612fe883b6d7bdc0bc755afb+612/hu297A5D_AE2CH6SK4DG-EXT_R2.fastq.gz
-
+++ /dev/null
-sample: WGC071838D
-
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-
-fastq1:
- class: File
- location: keep:24df1ea93ad5275aa511462ea85b0548+20283/WGC071838D_R1.fastq.gz
-
-fastq2:
- class: File
- location: keep:24df1ea93ad5275aa511462ea85b0548+20283/WGC071838D_R2.fastq.gz
-
-clinvarvcf:
- class: File
- location: keep:242ba3b9049aee86ab2c72db4f3b2822+223/38/clinvar.vcf.gz
-
-reportfunc:
- class: File
- location: ../src/annotation/generatereport.py
-
-headhtml:
- class: File
- location: /data-sdd/pgp/arvados-tutorial/src/annotation/head.html
-
-tailhtml:
- class: File
- location: /data-sdd/pgp/arvados-tutorial/src/annotation/tail.html
+++ /dev/null
-sample: hu297A5D_AE2CH6SK4DG
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-fastq1:
- class: File
- location: keep:06a9452462b67765a81352638a610a5a+198/hu297A5D_AE2CH6SK4DG-EXT_100000_R1.fastq.gz
-fastq2:
- class: File
- location: keep:06a9452462b67765a81352638a610a5a+198/hu297A5D_AE2CH6SK4DG-EXT_100000_R2.fastq.gz
-