Alex Coleman [Wed, 20 Sep 2023 16:23:44 +0000 (10:23 -0600)]
20461 Updating README
Updating dockerfile paths in README.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Thu, 14 Sep 2023 16:54:36 +0000 (10:54 -0600)]
20461: Updating main workflow and README.md
Updating main workflow to call scatter workflows, and adding some more info to README.md
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Tue, 22 Aug 2023 18:38:13 +0000 (12:38 -0600)]
20461 updating resource requirements
Updating resource requirements for helper CWL.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Tue, 22 Aug 2023 16:35:47 +0000 (10:35 -0600)]
20461: Updating workflow and README.
Making documentation changes to readme, and fixing sampleid issue for workflow.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Mon, 31 Jul 2023 18:01:53 +0000 (12:01 -0600)]
20461: Updating to support multiple possible types of sample-id input.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Fri, 14 Jul 2023 16:29:44 +0000 (10:29 -0600)]
Adding copyright headers.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Thu, 13 Jul 2023 18:55:09 +0000 (12:55 -0600)]
Updating README.md to further explain different inputs.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Alex Coleman [Fri, 30 Jun 2023 16:12:36 +0000 (10:12 -0600)]
Updating README to better describe what inputs are required for different subworkflows.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
acoleman2000 [Mon, 26 Jun 2023 21:38:44 +0000 (15:38 -0600)]
Updating main workflow for appropriate conditional logic.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
acoleman2000 [Wed, 21 Jun 2023 16:30:42 +0000 (10:30 -0600)]
Updating main workflow to add spacing.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
acoleman2000 [Fri, 16 Jun 2023 21:17:43 +0000 (15:17 -0600)]
Updating workflow so scatter that occurs before conditional evalution occurs without errors (setting default to be [])
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
acoleman2000 [Fri, 16 Jun 2023 16:58:06 +0000 (10:58 -0600)]
Updating Dockerfile for vcfutil to point to my gvcf repo with updated changes for .gz files, and proper base image.
Updating workflow to support EITHER list of vcf files OR directory of vcf files to be provided. Adding more conditional logic for workflows.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>.
acoleman2000 [Wed, 7 Jun 2023 16:55:57 +0000 (10:55 -0600)]
Updating README.md.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
acoleman2000 [Fri, 12 May 2023 18:25:56 +0000 (14:25 -0400)]
Removing files (moved to subdirs) and updating main wf.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>.
acoleman2000 [Fri, 12 May 2023 18:19:49 +0000 (14:19 -0400)]
Organizing cwl files and creating conditional workflow.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>.
acoleman2000 [Thu, 4 May 2023 15:33:51 +0000 (11:33 -0400)]
Adding README.md.
Arvados-DCO-1.1-Signed-off-by: Alex Coleman <alex.coleman@curii.com>
Tom Clegg [Tue, 7 Mar 2023 04:46:39 +0000 (23:46 -0500)]
Merge branch '19995-glm-freq-threshold'
refs #19995
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 6 Mar 2023 16:21:25 +0000 (11:21 -0500)]
19995: Skip GLM on variants below frequency threshold.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 2 Feb 2023 17:02:25 +0000 (12:02 -0500)]
Merge branch '19997-glm'
refs #19997
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 2 Feb 2023 16:10:13 +0000 (11:10 -0500)]
Preserve pca components from input when writing samples.csv.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 2 Feb 2023 15:00:12 +0000 (10:00 -0500)]
Fix validation=0 in samples.csv (should be empty for non-c/c).
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 2 Feb 2023 15:00:01 +0000 (10:00 -0500)]
Turn off auto-retry.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Jiayong Li [Fri, 27 Jan 2023 19:39:13 +0000 (19:39 +0000)]
Merge branch '19868-pca-in-ml' into main
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 27 Jan 2023 19:38:44 +0000 (19:38 +0000)]
Merge branch 'main' into 19868-pca-in-ml
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 27 Jan 2023 19:37:08 +0000 (19:37 +0000)]
Change resource requirement of gvcf2fasta and imputation
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Tom Clegg [Fri, 20 Jan 2023 19:25:02 +0000 (14:25 -0500)]
Darker colors.
refs #19958
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 20 Jan 2023 18:37:34 +0000 (13:37 -0500)]
Bring back genomewideline/suggestiveline options.
refs #19958
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Jiayong Li [Fri, 20 Jan 2023 14:38:41 +0000 (14:38 +0000)]
Merge branch '19868-pca-in-ml' into main
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 20 Jan 2023 14:37:58 +0000 (14:37 +0000)]
Merge branch 'main' into 19868-pca-in-ml
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 20 Jan 2023 14:36:55 +0000 (14:36 +0000)]
Change slice-numpy-onehot parameter
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Tom Clegg [Thu, 19 Jan 2023 21:38:41 +0000 (16:38 -0500)]
Generate a manhattan plot for each chromosome.
refs #19958
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 13 Jan 2023 20:05:27 +0000 (15:05 -0500)]
Fix GLM p-value calculation when -case-control-only=true.
refs #19566
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Jiayong Li [Thu, 12 Jan 2023 16:18:07 +0000 (16:18 +0000)]
Merge branch '19868-pca-in-ml' into main
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Thu, 12 Jan 2023 16:17:19 +0000 (16:17 +0000)]
Merge branch 'main' into 19868-pca-in-ml
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Thu, 12 Jan 2023 16:07:42 +0000 (16:07 +0000)]
Fix shebang and license
refs #19868
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Tom Clegg [Tue, 10 Jan 2023 15:00:16 +0000 (10:00 -0500)]
Fix -min-coverage calculation broken when -case-control-only=true.
refs #19868
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 3 Jan 2023 21:29:12 +0000 (16:29 -0500)]
Add column headings to slice-numpy -pca sample list output.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 3 Jan 2023 21:23:05 +0000 (16:23 -0500)]
Fix validation flag in slice-numpy -pca sample list output.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 21 Dec 2022 19:46:20 +0000 (14:46 -0500)]
Merge branch '19526-manhattan-plot'
refs #19526
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Dec 2022 21:51:02 +0000 (16:51 -0500)]
19526: Output tile locations and pvalues at specified threshold.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Dec 2022 19:25:54 +0000 (14:25 -0500)]
Merge branch '19566-glm'
refs #19566
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Dec 2022 19:22:34 +0000 (14:22 -0500)]
19566: Preemptible flag.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Dec 2022 15:10:16 +0000 (10:10 -0500)]
19566: Record number of p-value calculations performed.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 16 Dec 2022 19:25:12 +0000 (14:25 -0500)]
19566: Silence logging from glm library.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 16 Dec 2022 15:45:25 +0000 (10:45 -0500)]
19566: Fix chi2 used instead of logistic regression p-value.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Jiayong Li [Thu, 15 Dec 2022 22:21:02 +0000 (22:21 +0000)]
Merge branch '19785-add-cwl' into main
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Thu, 15 Dec 2022 22:20:16 +0000 (22:20 +0000)]
Merge branch 'main' into 19785-add-cwl
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Thu, 15 Dec 2022 22:15:13 +0000 (22:15 +0000)]
Change lightning docker file so that it builds the current branch instead of main
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Tom Clegg [Thu, 15 Dec 2022 15:59:27 +0000 (10:59 -0500)]
19566: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 15 Dec 2022 15:59:03 +0000 (10:59 -0500)]
Merge branch '19526-manhattan-plot'
refs #19526
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 14 Dec 2022 20:00:46 +0000 (15:00 -0500)]
19566: Precompute cov glm.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 13 Dec 2022 15:03:06 +0000 (10:03 -0500)]
Merge branch '19566-glm'
refs #19566
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 12 Dec 2022 16:37:21 +0000 (11:37 -0500)]
19566: Test p-value vs. Python.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 2 Dec 2022 19:23:34 +0000 (14:23 -0500)]
19566: Normalize pca values before glm.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 2 Dec 2022 18:59:29 +0000 (13:59 -0500)]
19566: Add constant, check GLM results against Python.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Jiayong Li [Fri, 9 Dec 2022 21:09:17 +0000 (21:09 +0000)]
Merge branch '19785-add-cwl' into main
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 9 Dec 2022 21:08:35 +0000 (21:08 +0000)]
Fix readme
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 9 Dec 2022 21:05:32 +0000 (21:05 +0000)]
Merge branch '19785-add-cwl' into main
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Jiayong Li [Fri, 9 Dec 2022 21:03:13 +0000 (21:03 +0000)]
Add cwl and docker files
refs #19785
Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>
Tom Clegg [Thu, 1 Dec 2022 18:13:18 +0000 (13:13 -0500)]
19526: Tidy manhattan plot.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 29 Nov 2022 16:22:12 +0000 (11:22 -0500)]
19566: Option to limit pca components used in glm. Fix onehot use.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 29 Nov 2022 16:10:32 +0000 (11:10 -0500)]
19566: glm one column at a time.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 29 Nov 2022 15:43:29 +0000 (10:43 -0500)]
19566: Logistic regression p-value.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 28 Nov 2022 20:18:32 +0000 (15:18 -0500)]
Merge branch '19526-manhattan-plot'
refs #19526
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 28 Nov 2022 18:34:48 +0000 (13:34 -0500)]
19526: Add manhattan plot.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 18 Nov 2022 18:28:36 +0000 (13:28 -0500)]
Check for unparsed command line args.
refs #19780
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 18 Nov 2022 17:50:49 +0000 (12:50 -0500)]
19780: Fix indexing error.
refs #19780
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 16 Nov 2022 20:22:55 +0000 (15:22 -0500)]
19527: slice-numpy accepts samples.csv with or without p-values.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 14 Nov 2022 00:06:41 +0000 (19:06 -0500)]
19527: Update arvados sdk.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 11 Nov 2022 21:04:54 +0000 (16:04 -0500)]
19527: Fix odd # columns to pca.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 11 Nov 2022 17:44:16 +0000 (12:44 -0500)]
19527: Fix one-hot matrix.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 11 Nov 2022 17:35:09 +0000 (12:35 -0500)]
19527: Enable choose-samples to work without case/control info.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 11 Nov 2022 01:55:11 +0000 (20:55 -0500)]
19527: Fix Χ² calculation.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 10 Nov 2022 20:49:35 +0000 (15:49 -0500)]
19527: Output samples.csv earlier.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 10 Nov 2022 19:40:45 +0000 (14:40 -0500)]
19527: Fix crash on tag skipped for min-coverage.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 10 Nov 2022 16:16:59 +0000 (11:16 -0500)]
19527: Option to exclude non-case/control samples.
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 10 Nov 2022 15:24:53 +0000 (10:24 -0500)]
Merge branch '19527-training-set'
refs #19527
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 23:29:58 +0000 (18:29 -0500)]
19527: Accommodate header row in samples csv.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 23:08:57 +0000 (18:08 -0500)]
19527: Ignore empty line at EOF.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 20:12:33 +0000 (15:12 -0500)]
Merge branch '19524-pca'
refs #19524
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 20:11:48 +0000 (15:11 -0500)]
19527: Fix p-value calculation.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 19:39:31 +0000 (14:39 -0500)]
19527: Load training-set flag from samples.csv.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 7 Nov 2022 14:29:47 +0000 (09:29 -0500)]
19527: choose-samples: training/validation set.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 9 Nov 2022 19:24:49 +0000 (14:24 -0500)]
19527: Load training-set flag from samples.csv.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 7 Nov 2022 14:29:47 +0000 (09:29 -0500)]
choose-samples: training/validation set.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 2 Nov 2022 14:49:09 +0000 (10:49 -0400)]
19524: Fit PCA to specified training set.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 31 Oct 2022 15:53:26 +0000 (11:53 -0400)]
Merge branch '19524-pca'
refs #19524
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 21 Oct 2022 13:23:12 +0000 (09:23 -0400)]
19524: Fix matrix alloc size.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 20 Oct 2022 17:06:35 +0000 (13:06 -0400)]
19524: Flags choose which PCA components to plot.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 20 Oct 2022 15:23:08 +0000 (11:23 -0400)]
19524: Update colors, plot unknown-phenotype behind known.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 20 Oct 2022 14:07:11 +0000 (10:07 -0400)]
19524: Limit size of PCA input matrix.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 19 Oct 2022 20:17:36 +0000 (16:17 -0400)]
19524: Limit size of PCA input matrix.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 19 Oct 2022 19:55:56 +0000 (15:55 -0400)]
19524: configurable vcpus/ram
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 14 Oct 2022 17:34:23 +0000 (13:34 -0400)]
Merge branch '19524-pca'
refs #19524
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 18:46:46 +0000 (14:46 -0400)]
19524: Use marker shape to indicate second category variable.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 15:44:05 +0000 (11:44 -0400)]
19524: Remove obsolete pca cmds.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 14:47:51 +0000 (10:47 -0400)]
19524: Fix deprecated scipy.load.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 14:47:02 +0000 (10:47 -0400)]
19524: Read multiple phenotype files.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 14:43:36 +0000 (10:43 -0400)]
19524: Generalize plot colors a little.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 13 Oct 2022 13:57:37 +0000 (09:57 -0400)]
Fail if inadvertently using randomness.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>