Change resource requirement of gvcf2fasta and imputation

refs #19868

Arvados-DCO-1.1-Signed-off-by: Jiayong Li <jli@curii.com>

diff --git a/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl b/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl
index 5ddd3f3bf1b116eb1f9ad74acf90bc6f9743b36f..70ad46c654cb53ba22f5046052891ba96b12f011 100644 (file)
--- a/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl
+++ b/cwl/gvcf2fasta/concat-get_bed_varonlyvcf.cwl
@@ -12,7 +12,7 @@ hints:
     dockerPull: vcfutil
   ResourceRequirement:
     ramMin: 5000
-    outdirMin: 40000
+    tmpdirMin: 2000
 inputs:
   sampleid:
     type: string

diff --git a/cwl/imputation/bcftools-concat.cwl b/cwl/imputation/bcftools-concat.cwl
index 88092506c225432761577cd92ef85b0694d073c0..6e62e72b9a0143536a2451326c80e324476b03f4 100644 (file)
--- a/cwl/imputation/bcftools-concat.cwl
+++ b/cwl/imputation/bcftools-concat.cwl
@@ -12,7 +12,7 @@ hints:
   ResourceRequirement:
     coresMin: 2
     ramMin: 5000
-    tmpdirMin: 10000
+    tmpdirMin: 2000
 inputs:
   sample: string
   vcfs: