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10236: Merge branch 'master' into 10236-disable-event-listening
[arvados.git]
/
crunch_scripts
/
2016-10-11
Lucas Di Pentima
9701: Merge branch 'master' into 9701-collection-pack...
tree
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commitdiff
2016-10-11
radhika
Merge branch 'master' into 10078-dashboard-perf
tree
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commitdiff
2016-10-07
Peter Amstutz
Merge branch '8018-container-retry' closes #8018
tree
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commitdiff
2016-10-06
Tom Morris
Merge branch '10077-workbench-integration-tests' closes...
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commitdiff
2016-10-06
Peter Amstutz
Merge branch 'master' into 9307-cwl-use-tmp-output
tree
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commitdiff
2016-10-05
Peter Amstutz
Merge branch '10165-cwl-outputs' closes #10165
tree
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commitdiff
2016-10-04
Peter Amstutz
10165: Add --output-name option to set name of output...
tree
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commitdiff
2016-10-04
Peter Amstutz
Merge branch '9001-summary-skip-malformed-lines' closes...
tree
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commitdiff
2016-10-03
Lucas Di Pentima
9701: Merge branch '9463-change-arvput-use-collection...
tree
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commitdiff
2016-09-30
Peter Amstutz
Merge branch '9857-cwl-acceptlist-re' refs #9857
tree
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commitdiff
2016-09-30
Peter Amstutz
10165: Always make an output collection when a workflow...
tree
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commitdiff
2016-09-30
Peter Amstutz
Merge branch '10032-cwl-spinup' refs #10032
tree
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commitdiff
2016-09-29
Peter Amstutz
Merge branch '10151-cwl-dir-listing' closes #10151
tree
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commitdiff
2016-09-28
Peter Amstutz
10151: Ensure that job_order_object is normalized and...
tree
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commitdiff
2016-09-26
Peter Amstutz
Merge branch '10081-update-cwl-runner' refs #10081
tree
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commitdiff
2016-09-26
Peter Amstutz
10081: Fix renamed methods.
tree
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commitdiff
2016-08-25
Tom Clegg
Merge branch '9705-crunch2-install-guide-wip'
tree
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commitdiff
2016-08-19
Tom Clegg
Merge branch '9684-workflows'
tree
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commitdiff
2016-08-18
Lucas Di Pentima
Merge branch 'master' into 9333-api-server-invalid-sql
tree
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commitdiff
2016-08-18
radhika
closes #9684
tree
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commitdiff
2016-08-17
Lucas Di Pentima
Merge branch '9333-api-server-invalid-sql'
tree
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commitdiff
2016-08-15
radhika
closes #9709
tree
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commitdiff
2016-08-11
Peter Amstutz
Merge branch '9751-cwl-keep-dir' closes #9751
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Fix direct to keep directory references.
tree
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commitdiff
2016-07-18
Lucas Di Pentima
Merge branch '9438-http-default-timeout'
tree
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commitdiff
2016-07-15
Peter Amstutz
Merge branch 'master' into 9369-arv-cwl-docs
tree
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commitdiff
2016-07-15
Peter Amstutz
Merge branch '9570-cwl-runner-fixes' closes #9570 ...
tree
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commitdiff
2016-07-15
Peter Amstutz
9570: Just add keep: to input keep locators in cwl...
tree
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commitdiff
2016-07-15
Peter Amstutz
9570: Update cwl-runner for latest cwltool. Ensure...
tree
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commitdiff
2016-06-28
Peter Amstutz
Merge branch '9442-cwl-runtime-outdir' closes #9442
tree
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commitdiff
2016-06-28
Peter Amstutz
9442: Make cwl-runner crunch script backwards compatibl...
tree
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commitdiff
2016-06-27
Lucas Di Pentima
Merge branch '9446-refactor-keep-parallel-write-strategy'
tree
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commitdiff
2016-06-22
Peter Amstutz
Merge branch 'origin-8442-cwl-crunch2' closes #8442
tree
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commitdiff
2016-06-22
Peter Amstutz
Merge branch 'master' into origin-8442-cwl-crunch2
tree
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commitdiff
2016-06-21
Peter Amstutz
8442: cwl-runner crunch script must provide work_api...
tree
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commitdiff
2016-06-08
radhika
Merge branch 'master' into wtsi-hgi-8087-arv-cli-reques...
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commitdiff
2016-06-08
radhika
Merge branch '8087-arv-cli-request-body-from-file'...
tree
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commitdiff
2016-05-31
radhika
Merge branch 'master' into 8876-work-unit
tree
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commitdiff
2016-05-20
Tom Clegg
Merge branch 'wtsi-hgi-9231-rename-redunancy-to-replica...
tree
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commitdiff
2016-05-19
Peter Amstutz
Merge branch '8653-cwl-runner-handle-files' closes...
tree
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commitdiff
2016-05-19
Peter Amstutz
8653: Set basedir for CollectionFsAccess
tree
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commitdiff
2016-05-19
Peter Amstutz
8653: Update load_tool in cwl-runner crunch script
tree
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commitdiff
2016-05-18
Peter Amstutz
8653: Check that parameters are basestring before match...
tree
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commitdiff
2016-05-18
Peter Amstutz
8653: Update cwl-runner to match changes in sdk/arvados...
tree
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commitdiff
2016-05-18
Peter Amstutz
8653: cwl-runner crunch script rewrites keep file paths...
tree
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commitdiff
2016-04-26
Peter Amstutz
Merge branch '8931-event-thread-catch-exceptions' close...
tree
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commitdiff
2016-04-12
radhika
Merge branch 'master' into 8724-keep-block-check-script
tree
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commitdiff
2016-04-12
Peter Amstutz
Add args.ignore_docker_for_reuse=False to cwl-runner...
tree
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commitdiff
2016-04-01
Peter Amstutz
Merge branch 'master' into 8857-cwl-job-reuse
tree
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commitdiff
2016-03-31
Peter Amstutz
Merge branch '8840-lock-job-record' closes #8840
tree
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commitdiff
2016-03-31
Peter Amstutz
Merge branch '8654-arv-jobs-cwl-runner' closes #8654
tree
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commitdiff
2016-03-31
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-30
Peter Amstutz
8654: Add comments
tree
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commitdiff
2016-03-30
radhika
Merge branch 'master' into 8703-job-components
tree
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commitdiff
2016-03-30
Peter Amstutz
crunchrunner crunch script selects between $JOB_PARAMET...
tree
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' closes...
tree
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' into 8654...
tree
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commitdiff
2016-03-29
Peter Amstutz
8815: Now expect /usr/local/bin/crunchrunner. Bind...
tree
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commitdiff
2016-03-29
Peter Amstutz
8815: Crunch-job bind mounts crunchrunner binary and...
tree
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commitdiff
2016-03-28
Peter Amstutz
8654: Bump cwltool version dependency and print cwl...
tree
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commitdiff
2016-03-28
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-25
Peter Amstutz
8654: Passes 100% CWL conformance tests using running...
tree
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commitdiff
2016-03-23
Peter Amstutz
8654: Add value for quiet to args.
tree
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commitdiff
2016-03-23
Peter Amstutz
Merge branch '8766-cwl-collection-project' into 8654...
tree
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commitdiff
2016-03-22
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Job has uuid and state fields
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Add args.debug = True to get backtraces on errors
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Set args.submit = False
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Add runner job to pipeline instance.
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Update cwl:tool entry
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Fix keeppath and add ensure_unique_name to upload.
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Scanning for and uploading dependencies for submi...
tree
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commitdiff
2016-03-21
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-17
radhika
Merge branch '8087-arv-cli-request-body-from-file'...
tree
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commitdiff
2016-03-16
Peter Amstutz
Merge branch 'master' into 6518-crunch2-dispatch-slurm
tree
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commitdiff
2016-03-11
Peter Amstutz
8654: Collect output files into output collection,...
tree
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commitdiff
2016-03-11
Peter Amstutz
Merge branch '8673-cwl-runner-project-uuid' into 8654...
tree
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commitdiff
2016-03-11
Peter Amstutz
8654: Passes in local testing.
tree
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commitdiff
2016-03-11
Tom Clegg
Add 'build/' from commit '555b039609a3c8700c27767c255fd...
tree
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commitdiff
2016-03-10
Peter Amstutz
Fixes
tree
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commitdiff
2016-03-10
Peter Amstutz
Stuff
tree
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commitdiff
2016-03-09
Peter Amstutz
8654: cwl-runner crunch script
tree
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commitdiff
2016-03-09
Peter Amstutz
8654: cwl-runner crunch stub.
tree
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commitdiff
2016-03-09
radhika
closes #8508
tree
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commitdiff
2016-03-03
radhika
Merge branch '8497-datamanager-batchsize-1000' of https...
tree
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8620-better-README' closes #8620
tree
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8488-cwl-crunchrunner-collection' closes...
tree
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commitdiff
2016-03-01
Peter Amstutz
Add 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89...
tree
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commitdiff
2016-03-01
Peter Amstutz
Merge branch '6605-arv-copy-http' closes #6605
tree
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commitdiff
2016-02-29
Tom Clegg
8099: 7263: Merge branch 'hgi/7263-even-better-busy...
tree
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commitdiff
2016-02-19
Peter Amstutz
8488: Use crunchrunner binary instead of git repo
tree
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commitdiff
2016-02-18
Tom Clegg
Merge branch '8400-additional-gitignore' of https:...
tree
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commitdiff
2016-02-18
Peter Amstutz
Merge branch '8319-bcbio-cwl' closes #8319
tree
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commitdiff
2016-02-12
radhika
Merge branch 'master' into 8183-projects-dropdown
tree
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commitdiff
2016-02-10
radhika
Merge branch 'master' into 8286-fav-projects
tree
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commitdiff
2016-02-10
radhika
Merge branch 'master' into 8079-api-client-auth-uuid
tree
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commitdiff
2016-02-10
Tom Clegg
Merge branch '8284-fix-slurm-queue-timestamp-check...
tree
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commitdiff
2016-02-09
Nico Cesar
I "fonud" a typo
tree
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commitdiff
2016-02-09
Peter Amstutz
Merge branch '8404-catch-interrupted-syscall' closes...
tree
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commitdiff
2016-02-09
Peter Amstutz
8404: Adjust try block to just surround os.wait().
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