git.arvados.org - arvados.git/tree

drwxr-xr-x		..
-rwxr-xr-x	2031	GATK2-VariantFiltration	blob \| history \| raw
-rwxr-xr-x	2836	GATK2-bqsr	blob \| history \| raw
-rwxr-xr-x	7379	GATK2-merge-call	blob \| history \| raw
-rwxr-xr-x	5216	GATK2-realign	blob \| history \| raw
-rwxr-xr-x	5699	arvados-bcbio-nextgen.py	blob \| history \| raw
-rw-r--r--	3744	arvados_bwa.py	blob \| history \| raw
-rw-r--r--	1643	arvados_gatk2.py	blob \| history \| raw
-rw-r--r--	1504	arvados_ipc.py	blob \| history \| raw
-rw-r--r--	1372	arvados_picard.py	blob \| history \| raw
-rw-r--r--	3664	arvados_samtools.py	blob \| history \| raw
-rwxr-xr-x	3935	bwa-aln	blob \| history \| raw
-rwxr-xr-x	1197	bwa-index	blob \| history \| raw
-rwxr-xr-x	1202	collection-merge	blob \| history \| raw
-rwxr-xr-x	157	crunchrunner	blob \| history \| raw
drwxr-xr-x	-	crunchutil	tree \| history
-rwxr-xr-x	3506	cwl-runner	blob \| history \| raw
-rwxr-xr-x	1764	decompress-all.py	blob \| history \| raw
-rwxr-xr-x	420	file-select	blob \| history \| raw
-rwxr-xr-x	655	grep	blob \| history \| raw
-rwxr-xr-x	1012	hash	blob \| history \| raw
-rwxr-xr-x	4763	pgp-survey-import	blob \| history \| raw
-rwxr-xr-x	530	pgp-survey-parse	blob \| history \| raw
-rwxr-xr-x	6761	picard-gatk2-prep	blob \| history \| raw
-rw-r--r--	2427	pyrtg.py	blob \| history \| raw
-rwxr-xr-x	733	rtg-fasta2sdf	blob \| history \| raw
-rwxr-xr-x	1434	rtg-fastq2sdf	blob \| history \| raw
-rwxr-xr-x	1155	rtg-map	blob \| history \| raw
-rwxr-xr-x	988	rtg-snp	blob \| history \| raw
-rwxr-xr-x	16176	run-command	blob \| history \| raw
-rwxr-xr-x	2020	split-fastq.py	blob \| history \| raw
drwxr-xr-x	-	test	tree \| history