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8653: Check that parameters are basestring before matching regex.
author
Peter Amstutz <peter.amstutz@curoverse.com>
Wed, 18 May 2016 21:42:44 +0000
(17:42 -0400)
committer
Peter Amstutz <peter.amstutz@curoverse.com>
Wed, 18 May 2016 21:42:44 +0000
(17:42 -0400)
crunch_scripts/cwl-runner
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diff --git
a/crunch_scripts/cwl-runner
b/crunch_scripts/cwl-runner
index e011177c00db9212f139b401b796791704fbe274..5e7982cec5ec8c34f0c203e5e921e49c00e9845f 100755
(executable)
--- a/
crunch_scripts/cwl-runner
+++ b/
crunch_scripts/cwl-runner
@@
-38,7
+38,7
@@
try:
job_order_object["cwl:tool"] = keeppath(job_order_object["cwl:tool"])
for k,v in job_order_object.items():
- if arvados.util.keep_locator_pattern.match(v):
+ if
isinstance(v, basestring) and
arvados.util.keep_locator_pattern.match(v):
job_order_object[k] = {
"class": "File",
"path": keeppath(v)