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8442: cwl-runner crunch script must provide work_api parameter to ArvCwlRunner
authorPeter Amstutz <peter.amstutz@curoverse.com>
Tue, 21 Jun 2016 16:01:57 +0000 (12:01 -0400)
committerPeter Amstutz <peter.amstutz@curoverse.com>
Tue, 21 Jun 2016 16:01:57 +0000 (12:01 -0400)
constructor.

crunch_scripts/cwl-runner patch | blob | history

diff --git a/crunch_scripts/cwl-runner b/crunch_scripts/cwl-runner
index c786fc10b1715e1c5912e13ee98011aa94dceab3..71ba68d4232699efc540af50b23758a2bf6e6bef 100755 (executable)
--- a/crunch_scripts/cwl-runner
+++ b/crunch_scripts/cwl-runner
@@ -47,7 +47,7 @@ try:
 
     adjustFiles(job_order_object, keeppath)
 
-    runner = arvados_cwl.ArvCwlRunner(api_client=arvados.api('v1', model=OrderedJsonModel()))
+    runner = arvados_cwl.ArvCwlRunner(api_client=arvados.api('v1', model=OrderedJsonModel()), work_api="jobs")
 
     t = load_tool(job_order_object, runner.arvMakeTool)