git.arvados.org - arvados.git/history - crunch

[arvados.git] / crunch_scripts / cwl-runner

2017-07-05	Tom Clegg	Merge branch '8784-dir-listings'	blob \| commitdiff \| raw
2017-06-30	Tom Clegg	Merge branch '11807-yaml-to-json'	blob \| commitdiff \| raw
2017-06-30	radhika	Arvados-DCO-1.1-Signed-off-by: Radhika Chippada <radhik...	blob \| commitdiff \| raw
2017-06-29	Lucas Di Pentima	11789: Merge branch 'master' into 11789-arvput-exclude...	blob \| commitdiff \| raw
2017-06-29	Tom Clegg	Merge branch '2411-check-copyright'	blob \| commitdiff \| raw
2017-06-28	Tom Clegg	2411: Add copyright notices to everything.	blob \| commitdiff \| raw
2016-11-22	Lucas Di Pentima	5737: Merge branch 'master' into 5737-ruby231	blob \| commitdiff \| raw \| diff to current
2016-10-21	Tom Clegg	10008: Merge branch 'master' into 10008-flaky-token...	blob \| commitdiff \| raw \| diff to current
2016-10-21	Peter Amstutz	Merge branch 'master' into 10194-cwl-version-skew	blob \| commitdiff \| raw \| diff to current
2016-10-21	Tom Clegg	Merge branch 'crunch-job_finds_newer_docker_hashes...	blob \| commitdiff \| raw \| diff to current
2016-10-21	Peter Amstutz	Merge branch '10025-arvbox-layers' closes #10025	blob \| commitdiff \| raw \| diff to current
2016-10-20	Peter Amstutz	Merge branch 'master' into 10172-crunch2-container...	blob \| commitdiff \| raw \| diff to current
2016-10-17	Peter Amstutz	Merge branch 'master' into 10259-cwl-pipeline-null	blob \| commitdiff \| raw \| diff to current
2016-10-17	Peter Amstutz	Merge branch '10200-cwl-crunch-script' closes #10200	blob \| commitdiff \| raw \| diff to current
2016-10-17	Peter Amstutz	10200: Copy cwl-runner crunch script into arvados_cwl...	blob \| commitdiff \| raw \| diff to current
2016-10-17	Tom Clegg	Merge branch 'master' into 9956-keepstore-config	blob \| commitdiff \| raw \| diff to current
2016-10-11	Lucas Di Pentima	9701: Merge branch 'master' into 9701-collection-pack...	blob \| commitdiff \| raw \| diff to current
2016-10-11	radhika	Merge branch 'master' into 10078-dashboard-perf	blob \| commitdiff \| raw \| diff to current
2016-10-07	Peter Amstutz	Merge branch '8018-container-retry' closes #8018	blob \| commitdiff \| raw \| diff to current
2016-10-06	Tom Morris	Merge branch '10077-workbench-integration-tests' closes...	blob \| commitdiff \| raw \| diff to current
2016-10-06	Peter Amstutz	Merge branch 'master' into 9307-cwl-use-tmp-output	blob \| commitdiff \| raw \| diff to current
2016-10-05	Peter Amstutz	Merge branch '10165-cwl-outputs' closes #10165	blob \| commitdiff \| raw \| diff to current
2016-10-04	Peter Amstutz	10165: Add --output-name option to set name of output...	blob \| commitdiff \| raw \| diff to current
2016-10-04	Peter Amstutz	Merge branch '9001-summary-skip-malformed-lines' closes...	blob \| commitdiff \| raw \| diff to current
2016-10-03	Lucas Di Pentima	9701: Merge branch '9463-change-arvput-use-collection...	blob \| commitdiff \| raw \| diff to current
2016-09-30	Peter Amstutz	Merge branch '9857-cwl-acceptlist-re' refs #9857	blob \| commitdiff \| raw \| diff to current
2016-09-30	Peter Amstutz	10165: Always make an output collection when a workflow...	blob \| commitdiff \| raw \| diff to current
2016-09-30	Peter Amstutz	Merge branch '10032-cwl-spinup' refs #10032	blob \| commitdiff \| raw \| diff to current
2016-09-29	Peter Amstutz	Merge branch '10151-cwl-dir-listing' closes #10151	blob \| commitdiff \| raw \| diff to current
2016-09-28	Peter Amstutz	10151: Ensure that job_order_object is normalized and...	blob \| commitdiff \| raw \| diff to current
2016-09-26	Peter Amstutz	Merge branch '10081-update-cwl-runner' refs #10081	blob \| commitdiff \| raw \| diff to current
2016-09-26	Peter Amstutz	10081: Fix renamed methods.	blob \| commitdiff \| raw \| diff to current
2016-08-25	Tom Clegg	Merge branch '9705-crunch2-install-guide-wip'	blob \| commitdiff \| raw \| diff to current
2016-08-19	Tom Clegg	Merge branch '9684-workflows'	blob \| commitdiff \| raw \| diff to current
2016-08-18	Lucas Di Pentima	Merge branch 'master' into 9333-api-server-invalid-sql	blob \| commitdiff \| raw \| diff to current
2016-08-18	radhika	closes #9684	blob \| commitdiff \| raw \| diff to current
2016-08-17	Lucas Di Pentima	Merge branch '9333-api-server-invalid-sql'	blob \| commitdiff \| raw \| diff to current
2016-08-15	radhika	closes #9709	blob \| commitdiff \| raw \| diff to current
2016-08-11	Peter Amstutz	Merge branch '9751-cwl-keep-dir' closes #9751	blob \| commitdiff \| raw \| diff to current
2016-08-11	Peter Amstutz	9751: Fix direct to keep directory references.	blob \| commitdiff \| raw \| diff to current
2016-07-18	Lucas Di Pentima	Merge branch '9438-http-default-timeout'	blob \| commitdiff \| raw \| diff to current
2016-07-15	Peter Amstutz	Merge branch 'master' into 9369-arv-cwl-docs	blob \| commitdiff \| raw \| diff to current
2016-07-15	Peter Amstutz	Merge branch '9570-cwl-runner-fixes' closes #9570 ...	blob \| commitdiff \| raw \| diff to current
2016-07-15	Peter Amstutz	9570: Just add keep: to input keep locators in cwl...	blob \| commitdiff \| raw \| diff to current
2016-07-15	Peter Amstutz	9570: Update cwl-runner for latest cwltool. Ensure...	blob \| commitdiff \| raw \| diff to current
2016-06-28	Peter Amstutz	Merge branch '9442-cwl-runtime-outdir' closes #9442	blob \| commitdiff \| raw \| diff to current
2016-06-28	Peter Amstutz	9442: Make cwl-runner crunch script backwards compatibl...	blob \| commitdiff \| raw \| diff to current
2016-06-27	Lucas Di Pentima	Merge branch '9446-refactor-keep-parallel-write-strategy'	blob \| commitdiff \| raw \| diff to current
2016-06-22	Peter Amstutz	Merge branch 'origin-8442-cwl-crunch2' closes #8442	blob \| commitdiff \| raw \| diff to current
2016-06-22	Peter Amstutz	Merge branch 'master' into origin-8442-cwl-crunch2	blob \| commitdiff \| raw \| diff to current
2016-06-21	Peter Amstutz	8442: cwl-runner crunch script must provide work_api...	blob \| commitdiff \| raw \| diff to current
2016-06-08	radhika	Merge branch 'master' into wtsi-hgi-8087-arv-cli-reques...	blob \| commitdiff \| raw \| diff to current
2016-05-31	radhika	Merge branch 'master' into 8876-work-unit	blob \| commitdiff \| raw \| diff to current
2016-05-20	Tom Clegg	Merge branch 'wtsi-hgi-9231-rename-redunancy-to-replica...	blob \| commitdiff \| raw \| diff to current
2016-05-19	Peter Amstutz	Merge branch '8653-cwl-runner-handle-files' closes...	blob \| commitdiff \| raw \| diff to current
2016-05-19	Peter Amstutz	8653: Set basedir for CollectionFsAccess	blob \| commitdiff \| raw \| diff to current
2016-05-19	Peter Amstutz	8653: Update load_tool in cwl-runner crunch script	blob \| commitdiff \| raw \| diff to current
2016-05-18	Peter Amstutz	8653: Check that parameters are basestring before match...	blob \| commitdiff \| raw \| diff to current
2016-05-18	Peter Amstutz	8653: Update cwl-runner to match changes in sdk/arvados...	blob \| commitdiff \| raw \| diff to current
2016-05-18	Peter Amstutz	8653: cwl-runner crunch script rewrites keep file paths...	blob \| commitdiff \| raw \| diff to current
2016-04-26	Peter Amstutz	Merge branch '8931-event-thread-catch-exceptions' close...	blob \| commitdiff \| raw \| diff to current
2016-04-12	radhika	Merge branch 'master' into 8724-keep-block-check-script	blob \| commitdiff \| raw \| diff to current
2016-04-12	Peter Amstutz	Add args.ignore_docker_for_reuse=False to cwl-runner...	blob \| commitdiff \| raw \| diff to current
2016-04-01	Peter Amstutz	Merge branch 'master' into 8857-cwl-job-reuse	blob \| commitdiff \| raw \| diff to current
2016-03-31	Peter Amstutz	Merge branch '8840-lock-job-record' closes #8840	blob \| commitdiff \| raw \| diff to current
2016-03-31	Peter Amstutz	Merge branch '8654-arv-jobs-cwl-runner' closes #8654	blob \| commitdiff \| raw \| diff to current
2016-03-31	Peter Amstutz	Merge branch 'master' into 8654-arv-jobs-cwl-runner	blob \| commitdiff \| raw \| diff to current
2016-03-30	Peter Amstutz	8654: Add comments	blob \| commitdiff \| raw \| diff to current
2016-03-29	Peter Amstutz	Merge branch '8815-crunchrunner-everywhere' into 8654...	blob \| commitdiff \| raw \| diff to current
2016-03-28	Peter Amstutz	8654: Bump cwltool version dependency and print cwl...	blob \| commitdiff \| raw \| diff to current
2016-03-28	Peter Amstutz	Merge branch 'master' into 8654-arv-jobs-cwl-runner	blob \| commitdiff \| raw \| diff to current
2016-03-25	Peter Amstutz	8654: Passes 100% CWL conformance tests using running...	blob \| commitdiff \| raw \| diff to current
2016-03-23	Peter Amstutz	8654: Add value for quiet to args.	blob \| commitdiff \| raw \| diff to current
2016-03-23	Peter Amstutz	Merge branch '8766-cwl-collection-project' into 8654...	blob \| commitdiff \| raw \| diff to current
2016-03-22	Peter Amstutz	Merge branch 'master' into 8654-arv-jobs-cwl-runner	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Job has uuid and state fields	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Add args.debug = True to get backtraces on errors	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Set args.submit = False	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Add runner job to pipeline instance.	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Update cwl:tool entry	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Fix keeppath and add ensure_unique_name to upload.	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	8654: Scanning for and uploading dependencies for submi...	blob \| commitdiff \| raw \| diff to current
2016-03-21	Peter Amstutz	Merge branch 'master' into 8654-arv-jobs-cwl-runner	blob \| commitdiff \| raw \| diff to current
2016-03-11	Peter Amstutz	8654: Collect output files into output collection,...	blob \| commitdiff \| raw \| diff to current
2016-03-11	Peter Amstutz	Merge branch '8673-cwl-runner-project-uuid' into 8654...	blob \| commitdiff \| raw \| diff to current
2016-03-11	Peter Amstutz	8654: Passes in local testing.	blob \| commitdiff \| raw \| diff to current
2016-03-10	Peter Amstutz	Fixes	blob \| commitdiff \| raw \| diff to current
2016-03-10	Peter Amstutz	Stuff	blob \| commitdiff \| raw \| diff to current
2016-03-09	Peter Amstutz	8654: cwl-runner crunch script	blob \| commitdiff \| raw \| diff to current
2016-03-09	Peter Amstutz	8654: cwl-runner crunch stub.	blob \| commitdiff \| raw \| diff to current

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