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4042: Add dry-run mode to run-command. Test and fix examples from documentation.
[arvados.git] / crunch_scripts /
2014-10-03 Peter Amstutz4042: Add dry-run mode to run-command. Test and fix... tree | commitdiff
2014-10-03 Peter Amstutz4042: Functions defined in get_items() now moved into... tree | commitdiff
2014-10-03 Peter Amstutz4042: Subst will raise exceptions if files/directories... tree | commitdiff
2014-10-02 Peter Amstutz4042: another expand fix tree | commitdiff
2014-10-02 Peter Amstutz4042: expand list fix tree | commitdiff
2014-10-02 Peter Amstutz4042: add command pattern to list index tree | commitdiff
2014-10-02 Peter Amstutz4042: fix bad keys tree | commitdiff
2014-10-02 Peter Amstutz4042: fix bad syntax tree | commitdiff
2014-10-02 Peter Amstutz4042: Add list index tree | commitdiff
2014-10-02 Peter Amstutz4042: add "extract" tree | commitdiff
2014-10-02 Peter Amstutz4042: list handling bugfix tree | commitdiff
2014-10-02 Peter Amstutz4042: Fix syntax error tree | commitdiff
2014-10-02 Peter Amstutz4042: Add support for filter and group of lists tree | commitdiff
2014-10-02 Peter Amstutz4042: task.foreach should now accept multiple parameter... tree | commitdiff
2014-09-19 Peter AmstutzMerge branch 'master' into 3187-pipeline-instance-page tree | commitdiff
2014-09-18 Phil HodgsonMerge branch 'master' into 3661-copy-move-from-show tree | commitdiff
2014-09-18 Phil HodgsonMerge branch 'master' into 3338-tab-counts tree | commitdiff
2014-09-17 mishazMerge branch 'update-go-sdk-documentation' tree | commitdiff
2014-09-17 Peter AmstutzMerge branch '3187-pipeline-instance-page' into 3605... tree | commitdiff
2014-09-17 Tim PierceMerge branch '3705-keep-blockworklist' tree | commitdiff
2014-09-15 radhikaMerge branch 'master' into 2761-diagnostic-suite tree | commitdiff
2014-09-15 Tom Clegg3550: Merge branch 'master' into 3550-local-pipeline tree | commitdiff
2014-09-15 Peter AmstutzMerge branch '3187-pipeline-instance-page' into 3605... tree | commitdiff
2014-09-12 Peter AmstutzMerge branch '3187-start-finish-timestamps-tasks-pipeli... tree | commitdiff
2014-09-11 radhikaMerge branch 'master' into 3654-combine-selections tree | commitdiff
2014-09-11 Brett SmithClean up manifest whitespace in split-fastq. tree | commitdiff
2014-09-09 radhikaMerge branch 'master' into 3654-combine-selections tree | commitdiff
2014-09-09 Peter AmstutzMerge branch '3453-arv-list-docker-images' closes ... tree | commitdiff
2014-09-09 Peter AmstutzMerge branch 'master' into 3586-job-priority closes... tree | commitdiff
2014-09-08 Peter AmstutzMerge branch '3644-arv-mount-projects' closes #3644 tree | commitdiff
2014-09-08 Tim Pierce3823: bug fixes for arvados-bcbio-nextgen.py tree | commitdiff
2014-09-08 Peter AmstutzMerge branch 'master' into 3644-arv-mount-projects tree | commitdiff
2014-09-02 Peter AmstutzMerge branch 'master' into 3586-job-priority tree | commitdiff
2014-08-28 radhikaMerge branch 'master' into 3714-report-issue-issues tree | commitdiff
2014-08-28 radhikaMerge branch 'master' into 3637-copy-selections tree | commitdiff
2014-08-28 Peter AmstutzMerge branch '3719-improve-subst-error-reporting' close... tree | commitdiff
2014-08-28 Peter Amstutz3719: Python style/wording fixes. tree | commitdiff
2014-08-28 Peter Amstutz3719: Robust-put uses run-command logger. tree | commitdiff
2014-08-28 Peter Amstutz3719: run-command uses its own logger instead of the... tree | commitdiff
2014-08-28 Peter Amstutz3719: Raise more specific SubstitutionError instead... tree | commitdiff
2014-08-27 Tom Clegg3354: Merge branch 'master' into 3354-render-textile tree | commitdiff
2014-08-26 Tom CleggMerge branch '3627-selectable-projects' closes #3627 tree | commitdiff
2014-08-26 radhikaMerge branch 'master' into 3642-search-for-active-only tree | commitdiff
2014-08-26 radhikaMerge branch 'master' into 3620-admin-only-gear-menu tree | commitdiff
2014-08-26 radhikaMerge branch 'master' into 3112-report-bug tree | commitdiff
2014-08-26 Peter AmstutzFixed missing import in robust_put. no issue # tree | commitdiff
2014-08-20 Phil HodgsonMerge branch 'master' into 3354-render-textile tree | commitdiff
2014-08-19 Peter AmstutzMerge branch 'master' into 3036-collection-uuids tree | commitdiff
2014-08-18 Tom Clegg3114: Merge branch 'master' into 3114-copy-to-project tree | commitdiff
2014-08-16 Tom CleggMerge branch '2800-python-global-state' into 2800-pgs tree | commitdiff
2014-08-14 Tom Clegg3551: Merge branch 'master' into 3551-go-layout tree | commitdiff
2014-08-14 radhikaMerge branch 'master' into 3112-report-bug tree | commitdiff
2014-08-14 Peter AmstutzMerge branch '3505-virtual-work-dir' refs #3505 tree | commitdiff
2014-08-14 Peter AmstutzMerge branch 'master' into 3505-virtual-work-dir tree | commitdiff
2014-08-14 Peter Amstutz3505: tinker with logging tree | commitdiff
2014-08-14 Peter Amstutz3505: Fix typo in run-command tree | commitdiff
2014-08-14 Peter Amstutz3505: Move helper scripts into crunchutil module. ... tree | commitdiff
2014-08-13 Tom Clegg3551: Merge branch 'master' into 3551-go-layout tree | commitdiff
2014-08-13 Peter Amstutz3505: Fixed typo comparison of list against 0 instead... tree | commitdiff
2014-08-13 Peter Amstutz3505: Adjust order of initialization to reflect potenti... tree | commitdiff
2014-08-13 Peter AmstutzAdded virtual working directory "task.vwd" option to... tree | commitdiff
2014-08-12 radhikaMerge branch 'master' into 3296-user-profile tree | commitdiff
2014-08-12 Tom CleggMerge branch '3531-sort-jobs-with-pipelines' closes... tree | commitdiff
2014-08-12 Peter AmstutzFix regular expression in decompress-all.py refs ... tree | commitdiff
2014-08-12 Peter AmstutzFix syntax error in decompress-all.py refs #3373 tree | commitdiff
2014-08-12 Peter AmstutzMerge branch '3373-improve-gatk3-snv-pipeline' closes... tree | commitdiff
2014-08-12 Peter Amstutz3373: Test filename extension before attempting to... tree | commitdiff
2014-08-08 Peter Amstutz3373: split-fastq: Fix loop tree | commitdiff
2014-08-08 Peter Amstutz3373: split-fastq: Fix regex again tree | commitdiff
2014-08-08 Peter Amstutz3373: Fix wrong regex group tree | commitdiff
2014-08-08 Peter Amstutz3373: Fix syntax error in split-fastq tree | commitdiff
2014-08-08 Peter Amstutz3373: more run-command cleanup, global p -> taskp,... tree | commitdiff
2014-08-08 Peter Amstutz3373: Switch run-command to use python logging instead... tree | commitdiff
2014-08-08 Peter Amstutz3373: split-fastq: merge loops to capture both single... tree | commitdiff
2014-08-08 Peter Amstutz3373: decompress-all: cleaned up code a bit. Fail... tree | commitdiff
2014-08-07 Peter AmstutzMerge branch 'master' into 3373-improve-gatk3-snv-pipeline tree | commitdiff
2014-08-06 Peter AmstutzMerge branch 'master' into 3373-improve-gatk3-snv-pipeline tree | commitdiff
2014-08-05 Peter AmstutzDisable chunking tree | commitdiff
2014-08-05 Peter AmstutzChunking fastq seems to work, but is very slow. tree | commitdiff
2014-08-05 Peter Amstutzarvados.LOCATOR tree | commitdiff
2014-08-05 Peter Amstutzimport string tree | commitdiff
2014-08-05 Peter AmstutzFix syntax error tree | commitdiff
2014-08-05 Peter AmstutzCheck for None tree | commitdiff
2014-08-05 Peter AmstutzWorking on split-fastq to actually split the fastq... tree | commitdiff
2014-08-05 Peter AmstutzRenamed "job.src" to "job.srcdir", "job.id" to "job... tree | commitdiff
2014-08-04 Peter Amstutz$(link ...) now expects complete path. tree | commitdiff
2014-08-04 Peter AmstutzMerge branch 'master' into 3373-improve-gatk3-snv-pipeline tree | commitdiff
2014-08-04 Peter AmstutzMerge branch '3373-improve-gatk3-snv-pipeline' of git... tree | commitdiff
2014-08-04 Peter AmstutzSimplified collection-merge. Added comments to collect... tree | commitdiff
2014-08-04 Peter AmstutzWorks now tree | commitdiff
2014-08-04 Peter Amstutzfix parameters tree | commitdiff
2014-08-04 Peter AmstutzDecompress-all wip tree | commitdiff
2014-08-01 Peter AmstutzAdded $(task.outdir) and $(job.src) tree | commitdiff
2014-07-30 Peter AmstutzFix $(node.cores) tree | commitdiff
2014-07-30 Peter Amstutzstr or unicode tree | commitdiff
2014-07-30 Peter Amstutzextra / after dir tree | commitdiff
2014-07-30 Peter AmstutzBetter error from glob tree | commitdiff
2014-07-30 Peter AmstutzPretty print tree | commitdiff
2014-07-30 Peter AmstutzRearranged exception handling a little more tree | commitdiff
2014-07-30 Peter AmstutzMore logging tree | commitdiff
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