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Fix recomputing diffs N times.
[lightning.git]
/
cmd.go
2021-06-15
Tom Clegg
Add "flake" command (read, tidy, write).
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2021-02-19
Tom Clegg
Upgrade to debian bullseye to get bcftools 1.11.
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2021-02-08
Tom Clegg
Move command line tool to subdir.
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2021-01-18
Tom Clegg
Add dumpgob command.
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2020-12-02
Tom Clegg
Improve import and vcf2fasta performance.
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2020-11-05
Tom Clegg
Add numpy-common-variants sanity check.
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2020-11-01
Tom Clegg
Write annotations along with numpy.
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2020-10-28
Tom Clegg
Export tile annotations.
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2020-10-25
Tom Clegg
Plot import stats.
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2020-10-25
Tom Clegg
Write import stats to stats.json.
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2020-10-25
Tom Clegg
Turn off timestamps in logs when not logging to a tty.
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2020-10-20
Tom Clegg
Export VCF-ish.
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2020-10-16
Tom Clegg
Add merge cmd.
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2020-10-14
Tom Clegg
Export HGVS.
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2020-10-07
Tom Clegg
Add stats command.
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2020-09-17
Tom Clegg
Do PCA in Go.
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2020-05-12
Tom Clegg
Add diff-fasta command.
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2020-03-12
Tom Clegg
Add python2 to docker image.
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2020-03-10
Tom Clegg
Generate genome file from fasta.
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2020-03-10
Tom Clegg
Install bedtools.
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2020-03-09
Tom Clegg
Add vcf2fasta command.
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2020-03-04
Tom Clegg
Add plot subcommand.
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2020-03-03
Tom Clegg
Add pca subcommand.
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2020-02-05
Tom Clegg
Add filter subcommand.
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2020-02-04
Tom Clegg
Split gvcf2numpy command into import and export-numpy.
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2020-01-13
Tom Clegg
Initial tiling code.
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