Install bedtools.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>

diff --git a/cmd.go b/cmd.go
index 5e1f7fcb5896f6a7e1e6e74e6d32f39763274006..65ce7e2a0ca6cee8da0c6d9670d97c1b35d207f3 100644 (file)
--- a/cmd.go
+++ b/cmd.go
@@ -43,7 +43,7 @@ func (cmd *buildDockerImage) RunCommand(prog string, args []string, stdin io.Rea
 RUN DEBIAN_FRONTEND=noninteractive \
   apt-get update && \
   apt-get dist-upgrade -y && \
-  apt-get install -y --no-install-recommends bcftools samtools python3-sklearn python3-matplotlib && \
+  apt-get install -y --no-install-recommends bcftools bedtools samtools python3-sklearn python3-matplotlib && \
   apt-get clean
 `), 0644)
        if err != nil {