Brett Smith [Tue, 23 Apr 2024 14:22:42 +0000 (10:22 -0400)]
21700: Fix option typo
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Tue, 23 Apr 2024 13:25:59 +0000 (09:25 -0400)]
21700: Set GEM_PATH in Rails postinst
This is necessary to get the desired behavior in Ruby 2.7. Otherwise
Bundler gets installed somewhere else.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Mon, 22 Apr 2024 20:07:18 +0000 (16:07 -0400)]
21700: Adjust `gem fetch` syntax to work on Ruby 2.7
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Mon, 22 Apr 2024 18:32:40 +0000 (14:32 -0400)]
21700: Narrow `bundle install` workaround options
This prevents `gem install` from resolving dependencies differently from
Bundler and creating its own set of problems.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Mon, 22 Apr 2024 17:51:36 +0000 (13:51 -0400)]
21700: Install Bundler alongside bundled gems in Rails postinst
See comments for rationale.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Sat, 20 Apr 2024 13:43:01 +0000 (09:43 -0400)]
21700: Work around incomplete `bundle cache` bug
It seems like the problem I was working around for zlib 3.1.0 on Ubuntu
20.04 earlier can affect basically any gem at any step, if you happen to
already have the exact same version installed on the system. This commit
adds workarounds for all gems at all steps of the bundle setup.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Sat, 20 Apr 2024 13:36:55 +0000 (09:36 -0400)]
21700: Make workbench2 package respect --only-build
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 22:41:19 +0000 (18:41 -0400)]
21700: Remove package-test-dockerfiles/Makefile
There's zero need for it after removing RVM.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 19:13:22 +0000 (15:13 -0400)]
21700: Select more desired modules in rocky8 test Dockerfile
This prevents needless thrashing when the Dockerfile installs one set of
packages and then packages we test enable and reinstall a different
module stream.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 16:46:10 +0000 (12:46 -0400)]
21700: Test the RailsAPI Bundler version
See comments for rationale.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 16:45:12 +0000 (12:45 -0400)]
21700: Update the RailsAPI Bundler version
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 16:11:36 +0000 (12:11 -0400)]
21700: Remove `bundle install` from package build Dockerfiles
This work is better done in the package build script. I suspect the
problem that it's trying to solve is better solved by isolating the
RailsAPI `vendor` directory as done in
0333f33a7413aadb7159563e0a7aa2a0a50acaec.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 16:05:18 +0000 (12:05 -0400)]
21700: Standardize on Bundler~>2.4.0
These are the last versions to support Ruby 2.7, which we're still
supporting as I write this.
Our usual install recipe is:
gem install --conservative --version '~> 2.4.0' bundler
In environments where we *know* we have Ruby 3, that becomes:
gem install --conservative --version '>= 2.4.0' bundler
As long as we have something at least as recent as 2.4.0, that should be
enough for function. This recipe meets our functional needs while
striking a balance between being easy to implement and avoiding
redundant installs.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 15:24:36 +0000 (11:24 -0400)]
21700: Remove RVM support
We haven't reliably tested this in a long time, and it's a lot of code
for no benefit. In general we want to support the versions of Ruby that
come with the distributions we support. Anybody in a very weird case can
install a supported version of Ruby from source.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 19 Apr 2024 14:05:45 +0000 (10:05 -0400)]
21700: Better isolate Bundler from the build source
This helps ensure that when we build the RailsAPI package with Bundler,
we don't accidentally pick up settings or files from the developer's
machine. This shouldn't matter when we build packages on Jenkins but
this makes it easier for developers to test package builds on their own
systems.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Tom Clegg [Fri, 19 Apr 2024 18:11:30 +0000 (14:11 -0400)]
Merge branch '21606-keep-web-output-buffer'
closes #21606
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Brett Smith [Fri, 19 Apr 2024 18:08:11 +0000 (14:08 -0400)]
Merge branch '21383-salt-debian12'
Closes #21524, #21583, #21661.
Refs #21383.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Tom Clegg [Fri, 19 Apr 2024 18:07:16 +0000 (14:07 -0400)]
21606: Document units for WebDAVOutputBuffer config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Brett Smith [Thu, 18 Apr 2024 15:11:31 +0000 (11:11 -0400)]
21254: Add workaround for Bundler zlib bug
See comments for discussion.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 7 Mar 2024 19:36:01 +0000 (14:36 -0500)]
21383: Salt provisioner installs systemd-cron
See comments for rationale.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Wed, 6 Mar 2024 14:31:25 +0000 (09:31 -0500)]
21383: Reconfigure Salt logrotate service
See comments for rationale.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Tue, 5 Mar 2024 19:17:15 +0000 (14:17 -0500)]
21383: Remove docker-ce version pin
Now that we've removed support for older distros, all the distros we
currently support have the minimum version of docker-ce
available. Meanwhile, that older version is not available for some newer
distros we want to support. Remove the pin accordingly.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Tue, 5 Mar 2024 19:16:06 +0000 (14:16 -0500)]
21383: Standardize on os-release variables
This script was getting this information three different ways: by
reading /etc/os-release, calling lsb_release, and using its own internal
lookup tables. This is silly. Just read /etc/os-release and use those
variables throughout.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Tue, 16 Jan 2024 14:17:04 +0000 (09:17 -0500)]
21383: Update Salt installer formulas
I'm not aware of any specific reason we need this, but it's good
maintenance since I'm in here anyway.
letsencrypt 3.0.0 does introduce a backwards incompatible change because
it no longer installs the Apache plugin by default. Since we never
wanted that plugin and always specify the pkgs we want anyway, this
shouldn't affect us.
https://github.com/saltstack-formulas/letsencrypt-formula/blob/master/CHANGELOG.md#300-2021-07-02
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Mon, 15 Jan 2024 20:29:34 +0000 (15:29 -0500)]
21383: Use postgres formula with support for Debian 12
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Mon, 15 Jan 2024 18:39:34 +0000 (13:39 -0500)]
21383: Upgrade Salt installer to Salt 3006
Salt 3006 is the first version to support Python 3.11, included with
Debian 12.
Because 3006 is the current stable, we have to update the bootstrap
invocation to match. I guess we'll have to make another change after it
becomes old-stable.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 5 Apr 2024 19:06:12 +0000 (15:06 -0400)]
21583: Configure Passenger with passenger_preload_bundler
This helps avoid situations where Passenger loads gems that create
a conflict with our bundle. We're currently seeing this with the base64
gem, where Passenger on Ruby 3.[0-3] can load the version shipped with
that Ruby before our RailsAPI bundle gets loaded. This causes an error:
[ E 2024-03-12 15:12:44.8347 907382/Tf age/Cor/App/Implementation.cpp:221 ]:
Could not spawn process for application /var/www/arvados-api/current:
The application encountered the following error: You have already
activated base64 0.1.1, but your Gemfile requires base64 0.2.0. Since
base64 is a default gem, you can either remove your dependency on it or
try updating to a newer version of bundler that supports base64 as a
default gem. (Gem::LoadError)
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 5 Apr 2024 19:00:54 +0000 (15:00 -0400)]
21583: Update link for Phusion Passenger install guide
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Tom Clegg [Wed, 17 Apr 2024 15:37:11 +0000 (11:37 -0400)]
Merge branch '21644-flaky-test'
fixes #21644
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Brett Smith [Tue, 16 Apr 2024 15:12:47 +0000 (11:12 -0400)]
Merge branch '21692-go-packages-no-build-id'
Refs #21692. Closes #21694.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 12 Apr 2024 18:56:45 +0000 (14:56 -0400)]
21692: Test RPM packages for build id conflicts
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 12 Apr 2024 18:21:20 +0000 (14:21 -0400)]
21692: Don't include build id links in Go packages
See comment for rationale.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Tom Clegg [Fri, 12 Apr 2024 18:52:07 +0000 (14:52 -0400)]
21644: Fix unreliable test.
Test the bucket that doesn't depend on actual test speed.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Stephen Smith [Fri, 12 Apr 2024 14:50:31 +0000 (10:50 -0400)]
Merge branch '21691-wb2-dependency-upgrades' into main. Closes #21691
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 13:22:25 +0000 (09:22 -0400)]
Merge branch '21688-io-panel-style-fixes' into main. Closes #21688
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 13:10:04 +0000 (09:10 -0400)]
21691: Update tar to 6.2.1
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 00:30:42 +0000 (20:30 -0400)]
21691: Add minor improvements to test reliability
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 00:29:04 +0000 (20:29 -0400)]
21691: Add types to replace files methods for differing parameter/result types
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 00:27:50 +0000 (20:27 -0400)]
21691: Add type to login method to satisfy result type
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 00:27:01 +0000 (20:27 -0400)]
21691: Avoid error by changing method of clearing token
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 12 Apr 2024 00:26:15 +0000 (20:26 -0400)]
21691: Update axios to 0.28.1
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Tom Clegg [Thu, 28 Mar 2024 14:40:12 +0000 (10:40 -0400)]
21606: Change default output buffer size to 0.
See https://dev.arvados.org/issues/21606#note-8.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 28 Mar 2024 14:39:34 +0000 (10:39 -0400)]
21606: Improve code comments.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 21 Mar 2024 15:01:46 +0000 (11:01 -0400)]
21606: Update config comment.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 19 Mar 2024 19:37:32 +0000 (15:37 -0400)]
21606: Add output buffer for webdav downloads.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 11 Apr 2024 19:01:22 +0000 (15:01 -0400)]
Merge branch '21657-diag-docker-format'
fixes #21657
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Stephen Smith [Thu, 11 Apr 2024 17:57:26 +0000 (13:57 -0400)]
Merge branch '21659-gh-workflow-tests' into main. Closes #21659
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Thu, 11 Apr 2024 17:48:50 +0000 (13:48 -0400)]
21688: Move json out of tableWrapper and add flexbox stretch to collection tab
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Lucas Di Pentima [Thu, 11 Apr 2024 15:17:08 +0000 (12:17 -0300)]
Merge branch '21654-net-imap-downgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 11 Apr 2024 14:42:28 +0000 (11:42 -0300)]
21654: Reverts net-imap to a previous version to keep ruby compatibility.
Bundler upgraded this gem when upgrading rails to 7.0.8.1, making it
incompatible with ruby 2.7.2, but rails doesn't explicitly asks a new
net-imap version.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Thu, 11 Apr 2024 14:35:17 +0000 (10:35 -0400)]
21657: Update docker archive ID introspection code for OCIv2.
Also, when not using the built-in image, we already rely on having
docker tools available, so use `docker inspect` instead of trying to
read the tarball.
This way the introspection code now only needs to work on the built-in
image. And now there's a test for that.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Thu, 11 Apr 2024 13:52:43 +0000 (10:52 -0300)]
Reverts nokogiri upgrade to a ruby-2.7 supported version.
Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lisa Knox [Wed, 10 Apr 2024 18:52:16 +0000 (14:52 -0400)]
Merge branch '21313-share-dialog-warning'
closes #21313
Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Wed, 10 Apr 2024 14:27:17 +0000 (10:27 -0400)]
21313: aligned share button styles with edit button styles Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Wed, 10 Apr 2024 14:18:53 +0000 (10:18 -0400)]
21313: removed vestigial saveEnabled prop Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 21:40:28 +0000 (18:40 -0300)]
Merge branch '21654-wb2-deps-upgrades'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Tue, 9 Apr 2024 19:30:15 +0000 (15:30 -0400)]
Merge branch '21639-prefetch' refs #21639
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lisa Knox [Tue, 9 Apr 2024 18:35:24 +0000 (14:35 -0400)]
21313: moved items so that all rows align properly Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Tue, 9 Apr 2024 17:37:29 +0000 (13:37 -0400)]
21313: moved data-cy to new button Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lisa Knox [Tue, 9 Apr 2024 17:10:27 +0000 (13:10 -0400)]
21313: removed underline from permissions select Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 16:08:12 +0000 (13:08 -0300)]
Merge branch '21654-protobuf-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 15:31:21 +0000 (12:31 -0300)]
Merge branch '21654-docker-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 15:21:50 +0000 (12:21 -0300)]
21654: Upgrades ex5-ext to address CVE-2024-27088
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 15:18:10 +0000 (12:18 -0300)]
Merge branch '21654-express-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 15:17:17 +0000 (12:17 -0300)]
21654: Upgrades ip packages to address CVE-2023-42282.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 15:08:03 +0000 (12:08 -0300)]
Merge branch '21654-follow-redirects-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:57:24 +0000 (11:57 -0300)]
21654: Upgrades github.com/docker/docker to address CVE-2024-24557
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:51:19 +0000 (11:51 -0300)]
21654: Upgrades google.golang.org/protobuf to address CVE-2024-24786
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lisa Knox [Tue, 9 Apr 2024 14:47:55 +0000 (10:47 -0400)]
21313: moved save button to bottom of share dialog Arvados-DCO-1.1-Signed-off-by: Lisa Knox <lisa.knox@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:45:23 +0000 (11:45 -0300)]
Merge branch '21654-rails-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:41:40 +0000 (11:41 -0300)]
21654: Upgrades follow-redirects addressing CVE-2024-28849 & CVE-2023-26159
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:24:01 +0000 (11:24 -0300)]
21654: Upgrades express to address CVE-2024-29041
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:15:45 +0000 (11:15 -0300)]
21654: Upgrades rails to 7.0.8.1 to address CVE-2024-26143
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:12:01 +0000 (11:12 -0300)]
21654: Upgrades rack to address several vulnerabilities.
* CVE-2024-26141
* CVE-2024-26146
* CVE-2024-25126
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 14:08:58 +0000 (11:08 -0300)]
Merge branch '21654-go-jose-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 13:37:20 +0000 (10:37 -0300)]
21654: Upgrades github.com/go-jose/go-jose/v3 to address CVE-2024-28180
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 13:29:26 +0000 (10:29 -0300)]
Merge branch '21654-browserify-sign-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 13:28:38 +0000 (10:28 -0300)]
Merge branch '21654-nokogiri-upgrade'. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 01:12:06 +0000 (22:12 -0300)]
21654: Upgrades nokogiri to address CVE-2024-25062
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 00:55:25 +0000 (21:55 -0300)]
21654: Upgrades browserify-sign to address CVE-2023-46234
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 9 Apr 2024 00:24:06 +0000 (21:24 -0300)]
Updates yarn.lock to unblock CI. Refs #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 8 Apr 2024 21:00:17 +0000 (18:00 -0300)]
Merge branch '21654-deps-updates'. Closes #21654
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Stephen Smith [Mon, 8 Apr 2024 02:18:17 +0000 (22:18 -0400)]
Add github test workflow
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Peter Amstutz [Mon, 8 Apr 2024 16:14:30 +0000 (12:14 -0400)]
21639: Add some additional prefetch tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 21 Mar 2024 19:55:58 +0000 (15:55 -0400)]
Don't pass -ti when $ci is defined, no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Stephen Smith [Mon, 8 Apr 2024 14:29:36 +0000 (10:29 -0400)]
Merge branch '21651-cmd-card-virtual-list' into main. Closes #21651
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Lucas Di Pentima [Mon, 8 Apr 2024 14:10:00 +0000 (11:10 -0300)]
21654: Upgrades @babel/traverse to address CVE-2023-45133
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Stephen Smith [Sun, 7 Apr 2024 17:55:57 +0000 (13:55 -0400)]
21651: Remove unused imports and squelch warnings
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Sun, 7 Apr 2024 17:02:10 +0000 (13:02 -0400)]
21651: Improve formatting and remove warnings
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Sun, 7 Apr 2024 16:24:18 +0000 (12:24 -0400)]
21651: Update browserdb
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Sat, 6 Apr 2024 03:05:57 +0000 (23:05 -0400)]
21651: Update io card unit tests for virtual list
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 5 Apr 2024 23:57:31 +0000 (19:57 -0400)]
21651: Change io panel json tab to virtual list, fix layout issues
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Fri, 5 Apr 2024 23:21:19 +0000 (19:21 -0400)]
21651: Create CopyResultToClipboard to format cmd for clipboard using callback
Performs formatting on large text only when clicked
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Stephen Smith [Sat, 6 Apr 2024 01:46:29 +0000 (21:46 -0400)]
21651: Add line formatter to VirtualCodeSnippet to do cmd card line processing
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Peter Amstutz [Sat, 6 Apr 2024 01:15:51 +0000 (21:15 -0400)]
21639: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Sat, 6 Apr 2024 00:20:03 +0000 (20:20 -0400)]
21639: Wrap around read counter, have slightly less indirection
Also add a comment about the "every 128 read ops" logic.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 5 Apr 2024 22:53:37 +0000 (18:53 -0400)]
21639: Reenable prefetch, but not on every read()
Only do prefetch every 128 invocations of read().
This should dramatically reduce the overhead of computing prefetch
while still getting some or moste of the benefits of prefetching.
Indeed, benchmarking suggests that this prefetching strategy, by
advising the kernel to map blocks into RAM, may actually improve
throughput on the high end.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Stephen Smith [Fri, 5 Apr 2024 21:43:16 +0000 (17:43 -0400)]
21651: Add virtual code snippet, implement in cmd card
Arvados-DCO-1.1-Signed-off-by: Stephen Smith <stephen@curii.com>
Lucas Di Pentima [Fri, 5 Apr 2024 20:43:38 +0000 (17:43 -0300)]
21654: Upgrades from babel-core 6 to @babel/core 7.
Still not enough to fix CVE-2023-45133
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Fri, 5 Apr 2024 19:46:03 +0000 (16:46 -0300)]
21654: Upgrades github.com/satori/go.uuid
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
projects / arvados.git / log