Brett Smith [Wed, 5 Jul 2023 19:46:21 +0000 (15:46 -0400)]
Merge branch '20710-shlex-quoting'
Closes #20710.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Wed, 5 Jul 2023 19:45:25 +0000 (15:45 -0400)]
20710: Remove old backwards compatibility import fallback
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Lucas Di Pentima [Wed, 5 Jul 2023 17:28:54 +0000 (14:28 -0300)]
20707: Don't rely on GRUB_CMDLINE_LINUX be empty in /etc/default/grub
Debian 11 AWS AMIs come with some settings added in that variable.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Brett Smith [Wed, 5 Jul 2023 16:20:57 +0000 (12:20 -0400)]
20710: Switch from pipes.quote to shlex.quote
pipes is deprecated in Python 3.11+ and slated to be removed in Python
3.13. Fortunately we only use pipes.quote, which is literally the same
as shlex.quote:
>>> import pipes
<stdin>:1: DeprecationWarning: 'pipes' is deprecated and slated for removal in Python 3.13
>>> import shlex
>>> pipes.quote is shlex.quote
True
Switch to that instead for continued support.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Lucas Di Pentima [Tue, 4 Jul 2023 19:25:46 +0000 (16:25 -0300)]
20707: Updates default to Debian 11 AMI. Forces cgroups v1 for crunchstat.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Fri, 30 Jun 2023 14:28:38 +0000 (10:28 -0400)]
20559: Trim session count explicitly instead of using LRU cache.
The LRU cache automatically implemented the session count limit by
dropping the oldest session, which would break our "one session per
token" rule (by evicting a session and creating a new one while the
old session was still in use) when there were more active sessions
than the configured limit.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Zoë Ma [Fri, 30 Jun 2023 07:24:55 +0000 (15:24 +0800)]
Doc: Update the included note about Workbench 2 transition.
Reword the text to center the Workbench 2.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 30 Jun 2023 06:57:31 +0000 (14:57 +0800)]
Doc: Update "Working with an Arvados git repository"
- Updated inline elements for Workbench 2.
TODO: Should double-check the instructions of using Workbench when a git
repo is ready.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 30 Jun 2023 06:54:07 +0000 (14:54 +0800)]
Doc: Update "Adding a new Arvados git repository"
- Updated inline elements and the first 2 figures for Workbench 2.
TODO: The last figure remains to be updated.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Wed, 28 Jun 2023 15:52:03 +0000 (23:52 +0800)]
Doc: Update "Starting a Workflow at the Command Line"
A minor fix for the mention of starting a workflow from Workbench.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Wed, 28 Jun 2023 15:39:51 +0000 (23:39 +0800)]
Doc: Update "Trashing and untrashing data"
Revised the part about untrashing using Workbench for Workbench 2,
including replacing the figure.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Mon, 26 Jun 2023 02:32:00 +0000 (10:32 +0800)]
Doc: Add a figure caption in "Downloading data".
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Sun, 25 Jun 2023 09:38:52 +0000 (17:38 +0800)]
Doc: Update "Downloading data".
- Updated the inline content for Workbench 2.
- Added a new screenshot for the creation of sharing URL.
TODO: The view of the URL from the PoV of the recipient has not been
updated.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Sat, 24 Jun 2023 09:09:30 +0000 (17:09 +0800)]
Doc: Update "Uploading data"
- Updated the text for Workbench 2 and expanded the steps.
- Removed the old figures and replaced them with new ones from Workbench
2.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Sat, 24 Jun 2023 06:17:41 +0000 (14:17 +0800)]
Doc: Remove reference to "dashboard" in template about adding SSH key
- The "dashboard" is no longer a named component of the Workbench UI.
- The <h3> under the <h1> is superfluous.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Sat, 24 Jun 2023 06:12:58 +0000 (14:12 +0800)]
Doc: Update "Accessing an Arvados VM with SSH - Unix Environments"
- Updated the included template about adding SSH keys, to reflect
changes in Workbench 2. A screenshot was updated.
- Added slightly more context to instructions about using ssh keypair
and agent for the benefit of new users.
- Minor textual fixes for clarity.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Sat, 24 Jun 2023 00:33:19 +0000 (08:33 +0800)]
Doc: Update "Accessing an Arvados VM with Webshell"
- Updated inline elements for Workbench 2.
- Replaced screenshot with higher-definition and updated one.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 23 Jun 2023 13:23:47 +0000 (21:23 +0800)]
Doc: Update "Getting an API token".
- Updated the references to Workbench 2 UI elements.
- Expand and reword some instructions about creating file in shell
(because a novice user may accidentally wipe out the file), and how
appending to .bashrc does its job.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 23 Jun 2023 09:48:55 +0000 (17:48 +0800)]
Doc: Update "Running a workflow using Workbench"
- Updated the procedures to match the operations in Workbench2.
- Updated the styles of inline elements to match their roles in
Workbench2.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 23 Jun 2023 09:47:58 +0000 (17:47 +0800)]
Doc: Update "Accessing Arvados Workbench" for Workbench 2
- Remove references to the "Dashboard"
- Replace the screenshot with higher-definition, updated one.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Zoë Ma [Fri, 23 Jun 2023 06:50:50 +0000 (14:50 +0800)]
Doc: Update Ruby dependencies and fix Rakefile
- Updated rubygems with "bundle update" for dependencies.
- Fixed Rakefile by replacing the obsoleted method aliases.
Arvados-DCO-1.1-Signed-off-by: Zoë Ma <zoe.ma@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 19:38:04 +0000 (16:38 -0300)]
20610: Tweaks postgresql access control to allow multiple controller hosts.
Also, explicitly adds the dispatcher's IP to the ACL, in case is located
on a different node.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 19:33:28 +0000 (16:33 -0300)]
20610: Tweaks controller's nginx pillar to support "balanced mode".
When balancer is enabled:
* SSL nginx is not needed
* Each controller should answer to its own hostname instead of the cluster's
domain.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 19:13:06 +0000 (16:13 -0300)]
20610: Updates arvados' pillar to handle the dispatcher's IP separately.
Also, re-arranges the _INT_IP envvars to be more explicit about IP sharing.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 19:05:31 +0000 (16:05 -0300)]
20610: Adds the new pillars for the balancer role.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 18:59:53 +0000 (15:59 -0300)]
20610: Adds 'balancer' role to the installer scripts.
Also, fixes a salt bootstrap issue dur to the fact that as of today, the 3004
version is no longer considered 'stable'.
Also, changes the way we use SSH so that no envvars are forwarded to remote
hosts, to avoid having 'setlocale' warnings mixed with salt cmd.run
outputs when using Debian distros to run the installer. This avoids issues
on the first run, before salt configures the remote node's locale.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 29 Jun 2023 18:57:40 +0000 (15:57 -0300)]
20610: Removes unused keepstore reference from Terraform.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Thu, 29 Jun 2023 20:47:57 +0000 (16:47 -0400)]
Merge branch '20606-reuse-preemptible'
fixes #20606
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 29 Jun 2023 18:59:16 +0000 (14:59 -0400)]
20559: Explain locking strategy in comments.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 29 Jun 2023 15:57:29 +0000 (11:57 -0400)]
20559: Refactor session sharing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 14 Jun 2023 21:17:18 +0000 (17:17 -0400)]
20559: Garbage collect unused per-collection mutexes.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 14 Jun 2023 20:45:58 +0000 (16:45 -0400)]
20559: Serialize writes for a given collection ID.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 13 Jun 2023 21:47:14 +0000 (17:47 -0400)]
20559: Test concurrent writes using same token.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 27 Jun 2023 14:36:08 +0000 (10:36 -0400)]
20606: Update retry tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 27 Jun 2023 13:31:38 +0000 (10:31 -0300)]
Merge branch '20665-installer-secrets-handling'. Closes #20665
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 27 Jun 2023 13:29:27 +0000 (10:29 -0300)]
20665: Fixes logic script error & minor docs improvements.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 26 Jun 2023 23:00:40 +0000 (19:00 -0400)]
20606: Don't reuse unstarted preemptible ctr for non-preemptible cr.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 26 Jun 2023 23:02:49 +0000 (19:02 -0400)]
20667: Add InitialQuotaEstimate config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Mon, 26 Jun 2023 17:24:39 +0000 (13:24 -0400)]
Merge branch '20619-arv-client-libfuse' closes #20619
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Mon, 26 Jun 2023 15:52:56 +0000 (12:52 -0300)]
20665: Provides examples on how to securely handle the secrets file.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 26 Jun 2023 15:47:54 +0000 (12:47 -0300)]
20665: Code style improvements.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 26 Jun 2023 15:17:48 +0000 (11:17 -0400)]
20667: Add at_quota metric.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 26 Jun 2023 15:06:35 +0000 (11:06 -0400)]
20667: Adjust timeout/retry settings to address occasional failures.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 26 Jun 2023 15:00:33 +0000 (11:00 -0400)]
20667: Reduce max supervisors if pool reaches cloud quota.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Fri, 23 Jun 2023 19:46:31 +0000 (15:46 -0400)]
20619: Add test arvados-client executable starts
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Brett Smith [Fri, 23 Jun 2023 18:44:17 +0000 (14:44 -0400)]
Merge branch '20663-login-sync-config'
Closes #20663.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Peter Amstutz [Fri, 23 Jun 2023 18:42:04 +0000 (14:42 -0400)]
20619: Add fpm-info for arvados-client to depend on fuse
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Brett Smith [Fri, 23 Jun 2023 18:14:38 +0000 (14:14 -0400)]
20663: Expand the default SyncIgnoredGroups
We discussed at standup that we prioritize the security of the default
configuration over backwards compatibility. This new default does that.
The list of groups is primarily informed by:
<https://wiki.debian.org/SystemGroups#Other_System_Groups>
<https://docs.fedoraproject.org/en-US/packaging-guidelines/UsersAndGroups/#_list_of_statically_allocated_uidgid_and_corresponding_package>
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 23 Jun 2023 18:01:21 +0000 (14:01 -0400)]
20663: Merge 2.6.3 upgrading notes
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 23 Jun 2023 15:24:22 +0000 (11:24 -0400)]
20663: Add IgnoredGroups configuration to arvados-login-sync
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Fri, 23 Jun 2023 13:25:24 +0000 (09:25 -0400)]
20663: Bugfix configuration lookup
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Tom Clegg [Thu, 22 Jun 2023 17:27:24 +0000 (13:27 -0400)]
Merge branch '20425-fed-pdh-retry'
fixes #20425
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 22 Jun 2023 16:55:05 +0000 (12:55 -0400)]
20425: Merge branch 'main' into 20425-fed-pdh-retry
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Brett Smith [Thu, 22 Jun 2023 15:10:29 +0000 (11:10 -0400)]
20663: Add configuration for arvados-login-sync
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 22 Jun 2023 14:52:05 +0000 (10:52 -0400)]
20663: Clarify comment about what "safe" config means
I might've liked to reveal configuration to authenticated clients, but
not unauthenticated ones. Unfortunately the code doesn't currently
support that.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 22 Jun 2023 14:43:36 +0000 (10:43 -0400)]
20663: Make arvados-login-sync actions configurable
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 22 Jun 2023 14:18:02 +0000 (10:18 -0400)]
20663: Use set operations for group management
Make code more consistent for easier readability.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 22 Jun 2023 14:16:40 +0000 (10:16 -0400)]
20663: Make minimum groups configurable
Note this no longer adds the user's own group to the membership
list. The administrator can control that by adjusting USERGROUPS_ENAB
in /etc/login.defs.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Brett Smith [Thu, 22 Jun 2023 13:48:44 +0000 (09:48 -0400)]
20663: Improve permissions and ownership handling
* Set permissions of everything at creation time.
* Only change ownership for things we touch.
* Manage group ownership as well as user
(having things owned by user:root is weird).
* Modernize style.
This is preparation for allowing administrators to configure what
resources arvados-login-sync manages.
Note this means arvados-login-sync no longer changes permissions for a
user's home directory. The administrator can do that by setting UMASK
in /etc/login.defs.
Arvados-DCO-1.1-Signed-off-by: Brett Smith <brett.smith@curii.com>
Peter Amstutz [Thu, 22 Jun 2023 14:43:12 +0000 (10:43 -0400)]
Merge branch '20374-workflow-main-prop' refs #20374
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 22 Jun 2023 14:41:10 +0000 (10:41 -0400)]
Merge branch '20660-r-sdk-pr-204' refs #20660
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 22 Jun 2023 14:29:53 +0000 (10:29 -0400)]
20374: add arv:workflowMain to metadata properties doc.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 22 Jun 2023 13:54:01 +0000 (09:54 -0400)]
20660: Tweaks to eliminate check warnings
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Wed, 21 Jun 2023 20:51:32 +0000 (17:51 -0300)]
20665: Updates single-host docs to reflect local.params.secrets addition.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 21 Jun 2023 20:27:41 +0000 (17:27 -0300)]
20665: Updates documentation reflecting the new local.params.secrets file.
Also, fixes some old issues related to the use of ${CLUSTER} and ${DOMAIN}.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 21 Jun 2023 19:11:11 +0000 (16:11 -0300)]
20665: Handles secrets on a separate file.
This allows the admin to give special treatment to it, to comply with security
policies that the local organization may have.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Wed, 21 Jun 2023 20:42:51 +0000 (16:42 -0400)]
Merge branch '20664-java-sdk-pr-205' refs #20664
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Wed, 21 Jun 2023 20:34:26 +0000 (16:34 -0400)]
20660: Add devtools::check to run_test.R
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
AnetaSta22 [Thu, 8 Jun 2023 12:20:35 +0000 (14:20 +0200)]
Update README.md
correct order
Add \dontrun{} in documentation in Arvados.R
Add \dontrun{} in documentation in ArvadosFile.R
Add \dontrun{} in documentation in Collection.R
Arvados-DCO-1.1-Signed-off-by: Aneta Stanczyk <aneta.stanczyk@contractors.roche.com>
Lucas Di Pentima [Tue, 20 Jun 2023 14:45:40 +0000 (11:45 -0300)]
Merge branch '20643-login-sync-homedir-check'. Closes #20643
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 20 Jun 2023 14:44:08 +0000 (11:44 -0300)]
20643: Skips user account processing earlier to avoid any partial configs.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Krzysztof Majewski [Tue, 20 Jun 2023 14:07:47 +0000 (16:07 +0200)]
Add new list method parameters: include_old_versions, include_trash
Arvados-DCO-1.1-Signed-off-by: Krzysztof Majewski majewski.kielce@gmail.com
Tom Clegg [Tue, 20 Jun 2023 14:03:20 +0000 (10:03 -0400)]
Merge branch '20602-queue-metrics'
refs #20602
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 20 Jun 2023 13:43:10 +0000 (09:43 -0400)]
Merge branch '20647-cr-logs-preflight'
fixes #20647
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Jun 2023 20:41:18 +0000 (16:41 -0400)]
20602: Allow lock requests to queue up to 2s (configurable).
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Mon, 19 Jun 2023 20:07:56 +0000 (16:07 -0400)]
Merge branch '20652-cwl-poll-select' refs #20652
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Mon, 19 Jun 2023 19:29:58 +0000 (15:29 -0400)]
20647: Improve comment on header deduplication.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Mon, 19 Jun 2023 18:56:48 +0000 (14:56 -0400)]
Merge branch '20637-prefetch-threads' refs #20637
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Mon, 19 Jun 2023 18:37:50 +0000 (14:37 -0400)]
20602: Report queue usage bucketed by priority.
Also report queue time stats for requests that are abandoned before
getting a processing slot.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 19 Jun 2023 15:53:38 +0000 (11:53 -0400)]
20602: Report queue time for pos/neg/zero-priority reqs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Sat, 17 Jun 2023 02:19:41 +0000 (22:19 -0400)]
20647: Fix duplicate response headers via reverse proxy.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 19:46:48 +0000 (15:46 -0400)]
20637: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 18:53:49 +0000 (14:53 -0400)]
20637: Fix arv-get
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 18:35:20 +0000 (14:35 -0400)]
20637: Move the prefetch thread pool to KeepClient
This avoids the problem of every Collection with its own BlockManager
creating its own prefetch thread pool, which becomes a resource leak
when reading files from 1000s of separate Collection objects.
The 'put' thread pool remains with the BlockManager but it now stops
the put threads on 'BlockManager.commit_all'. This is because this
method always flushes pending blocks anyway, and is called before the
collection record is written to the API server -- so we can assume
we've just finished a batch of writes to that collection, and might
not need the put thread pool any more, and if we do, we can just make
a new one.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 16 Jun 2023 17:58:16 +0000 (13:58 -0400)]
20602: Add queue metrics.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 15:48:24 +0000 (11:48 -0400)]
20652: When polling the API server, limit fields returned
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 16 Jun 2023 15:10:06 +0000 (11:10 -0400)]
Merge branch '20647-cr-logs-preflight'
fixes #20647
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 14:26:12 +0000 (10:26 -0400)]
Merge branch '20601-supervisor-fraction' refs #20601
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Fri, 16 Jun 2023 14:00:25 +0000 (10:00 -0400)]
20601: Rename Scheduler.maxSupervisors -> Scheduler.supervisorFraction
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Fri, 16 Jun 2023 06:06:35 +0000 (02:06 -0400)]
20647: Test CORS preflight request routing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 16 Jun 2023 06:05:59 +0000 (02:05 -0400)]
20647: Fix CORS preflight request handling.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 15 Jun 2023 19:53:34 +0000 (15:53 -0400)]
20601: MaxSupervisorFraction is relative to maxConcurrency.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 15 Jun 2023 18:59:49 +0000 (14:59 -0400)]
Merge branch '20601-big-ctr-queue'
refs #20601
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Thu, 15 Jun 2023 13:05:01 +0000 (10:05 -0300)]
20643: Improves error message.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 14 Jun 2023 15:07:44 +0000 (12:07 -0300)]
20643: Skip (with a log error) users that don't have their HOME dirs created.
Some systems may be able to resolve users from centralized services, but
need additional steps to allow them to log into the shell node. We then
expect that allowed users should already have their HOME directories created
before doing any syncing.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Tue, 13 Jun 2023 16:13:25 +0000 (12:13 -0400)]
Merge branch '20602-controller-qos'
refs #20602
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 13 Jun 2023 13:58:51 +0000 (09:58 -0400)]
20601: Add comment re fetch-by-uuid loop.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 12 Jun 2023 19:47:57 +0000 (15:47 -0400)]
20601: Slow down container queue polling when busy/slow.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 12 Jun 2023 18:47:30 +0000 (14:47 -0400)]
20602: Add IneligibleForQueuePriority const.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 12 Jun 2023 18:43:39 +0000 (14:43 -0400)]
20602: Use stdlib heap implementation.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
projects / arvados.git / log