#!/usr/bin/env cwl-runner
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: CC-BY-SA-3.0
+
cwlVersion: v1.0
class: CommandLineTool
hints:
DockerRequirement:
- dockerPull: biodckr/bwa
+ dockerPull: lh3lh3/bwa
-baseCommand: [bwa, mem]
+baseCommand: [mem]
arguments:
- {prefix: "-t", valueFrom: $(runtime.cores)}