X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/779c5400a4f376489f4abc8564f890f309ae3f20..0c7319e50b1e5c35d8645b26758f19bce0f32cb0:/doc/user/cwl/bwa-mem/bwa-mem.cwl diff --git a/doc/user/cwl/bwa-mem/bwa-mem.cwl b/doc/user/cwl/bwa-mem/bwa-mem.cwl index ba3b6a0e89..2001971264 100755 --- a/doc/user/cwl/bwa-mem/bwa-mem.cwl +++ b/doc/user/cwl/bwa-mem/bwa-mem.cwl @@ -1,12 +1,16 @@ #!/usr/bin/env cwl-runner +# Copyright (C) The Arvados Authors. All rights reserved. +# +# SPDX-License-Identifier: CC-BY-SA-3.0 + cwlVersion: v1.0 class: CommandLineTool hints: DockerRequirement: - dockerPull: biodckr/bwa + dockerPull: lh3lh3/bwa -baseCommand: [bwa, mem] +baseCommand: [mem] arguments: - {prefix: "-t", valueFrom: $(runtime.cores)}