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Fix arvbox "go get" for arvados-server no issue #
[arvados.git]
/
doc
/
user
/
cwl
/
bwa-mem
/
bwa-mem.cwl
diff --git
a/doc/user/cwl/bwa-mem/bwa-mem.cwl
b/doc/user/cwl/bwa-mem/bwa-mem.cwl
index ba3b6a0e897e69fc2bce2464302a2f3c6ff70043..20019712645902dbd1962b86a48bb8e59643c7b9 100755
(executable)
--- a/
doc/user/cwl/bwa-mem/bwa-mem.cwl
+++ b/
doc/user/cwl/bwa-mem/bwa-mem.cwl
@@
-1,12
+1,16
@@
#!/usr/bin/env cwl-runner
#!/usr/bin/env cwl-runner
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: CC-BY-SA-3.0
+
cwlVersion: v1.0
class: CommandLineTool
hints:
DockerRequirement:
cwlVersion: v1.0
class: CommandLineTool
hints:
DockerRequirement:
- dockerPull:
biodckr
/bwa
+ dockerPull:
lh3lh3
/bwa
-baseCommand: [
bwa,
mem]
+baseCommand: [mem]
arguments:
- {prefix: "-t", valueFrom: $(runtime.cores)}
arguments:
- {prefix: "-t", valueFrom: $(runtime.cores)}