git.arvados.org - arvados-tutorial.git/tree - WGS-processing/yml/helper/

drwxr-xr-x		..
-rw-r--r--	213	annotate-vcf.yml	blob \| history \| raw
-rw-r--r--	855	bwamem-gatk-report-wf.yml	blob \| history \| raw
-rw-r--r--	347	bwamem-samtools-sort.yml	blob \| history \| raw
-rw-r--r--	347	bwamem-samtools-view.yml	blob \| history \| raw
-rw-r--r--	239	fastqc.yml	blob \| history \| raw
-rw-r--r--	191	gather-vcf.yml	blob \| history \| raw
-rw-r--r--	327	gatk-applyBQSR.yml	blob \| history \| raw
-rw-r--r--	456	gatk-baserecalibrator-with-interval.yml	blob \| history \| raw
-rw-r--r--	327	gatk-haplotypecaller-with-interval.yml	blob \| history \| raw
-rw-r--r--	176	gatk-haplotypecaller.yml	blob \| history \| raw
-rw-r--r--	204	gatk-selectvariants.yml	blob \| history \| raw
-rw-r--r--	128	gatk-splitintervals.yml	blob \| history \| raw
-rw-r--r--	453	gatk-wf-with-interval.yml	blob \| history \| raw
-rw-r--r--	374	generate-report.yml	blob \| history \| raw
-rw-r--r--	88	getfastq.yml	blob \| history \| raw
-rw-r--r--	84	getgvcfs.yml	blob \| history \| raw
-rw-r--r--	142	gvcf-to-vcf.yml	blob \| history \| raw
-rw-r--r--	90	mark-duplicates.yml	blob \| history \| raw
-rw-r--r--	502	report-wf.yml	blob \| history \| raw
-rw-r--r--	87	samtools-index.yml	blob \| history \| raw
-rw-r--r--	99	samtools-sort.yml	blob \| history \| raw
-rw-r--r--	365	scatter-gatk-wf-with-interval.yml	blob \| history \| raw