bam: class: File location: keep:377c02de508dff9e4474f9a48d754933+53821/marked_dupsERR1726424.sorted.bam reference: class: File location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa sample: ERR1726424 scattercount: '32' knownsites1: class: File location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz