5 arv: "http://arvados.org/cwl#"
6 cwltool: "http://commonwl.org/cwltool#"
10 dockerPull: curii/bwa-samtools-picard
11 ShellCommandRequirement: {}
17 arv:RuntimeConstraints:
18 outputDirType: keep_output_dir
37 - $(runtime.outdir)/$(inputs.sample).fixed.bam