Try fixing solution links again

diff --git a/_episodes/01-introduction.md b/_episodes/01-introduction.md
index 84cb2746c786aaccf2548a7afb8d34287a176e34..c51e9adcf1bf9db54e5ce1addceec2d7f1af5784 100644 (file)
--- a/_episodes/01-introduction.md
+++ b/_episodes/01-introduction.md
@@ -39,7 +39,7 @@ expression".
 
 The entire process looks like this:
 
 
 The entire process looks like this:
 

-![](../assets/img/RNAseqWorkflow.png){: height="400px"}
+![]({{ relative_root_path }}/assets/img/RNAseqWorkflow.png){: height="400px"}

 
 For this training, we are only concerned with the middle analytical
 steps (skipping adapter trimming).
 
 For this training, we are only concerned with the middle analytical
 steps (skipping adapter trimming).

diff --git a/_episodes/02-workflow.md b/_episodes/02-workflow.md
index 8e76a006d1feeac272b4f6cf41337f9e095b1e57..6e173e1e44199f6b82d3d280b17b47b376d70bc9 100644 (file)
--- a/_episodes/02-workflow.md
+++ b/_episodes/02-workflow.md
@@ -450,5 +450,5 @@ outputs:
 {: .language-yaml }
 
 > ## Episode solution
 {: .language-yaml }
 
 > ## Episode solution

-> * <a href="{% link ../assets/answers/ep2/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep2/main.cwl %}">main.cwl</a>

 {: .solution}
 {: .solution}

diff --git a/_episodes/03-running.md b/_episodes/03-running.md
index 5e34eda84687e0251a9cfc51c7818804355ddfbf..2fbaafc9e5cb0423e3094c226038a00bdb9db3c5 100644 (file)
--- a/_episodes/03-running.md
+++ b/_episodes/03-running.md
@@ -158,7 +158,7 @@ Resource requirements you can set include:
 {: .challenge }
 
 > ## Episode solution
 {: .challenge }
 
 > ## Episode solution

-> * <a href="{% link ../assets/answers/ep3/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep3/main.cwl %}">main.cwl</a>

 {: .solution}
 
 # Workflow results
 {: .solution}
 
 # Workflow results

diff --git a/_episodes/04-commandlinetool.md b/_episodes/04-commandlinetool.md
index f94e7e8d053fc7826b608bfea20b197c9190e484..81f344700396de9b0987a7b41f2d8b15f0b227b6 100644 (file)
--- a/_episodes/04-commandlinetool.md
+++ b/_episodes/04-commandlinetool.md
@@ -266,6 +266,6 @@ add it to our workflow.
 {: .challenge}
 
 > ## Episode solution
 {: .challenge}
 
 > ## Episode solution

-> * <a href="{% link ../assets/answers/ep4/main.cwl %}">main.cwl</a>
-> * <a href="{% link ../assets/answers/ep4/featureCounts.cwl %}">featureCounts.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep4/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep4/featureCounts.cwl %}">featureCounts.cwl</a>

 {: .solution}
 {: .solution}

diff --git a/_episodes/05-scatter.md b/_episodes/05-scatter.md
index c7826e3e847af17a391527860a433162bf4293c5..a67eb2327f5b9dfa27eade2f493d20549641cc0f 100644 (file)
--- a/_episodes/05-scatter.md
+++ b/_episodes/05-scatter.md
@@ -75,9 +75,9 @@ requirements:
 {: .challenge }
 
 > ## Part 1 solution
 {: .challenge }
 
 > ## Part 1 solution

-> * <a href="{% link ../assets/answers/ep5/part1/main.cwl %}">main.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part1/alignment.cwl %}">alignment.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part1/featureCounts.cwl %}">featureCounts.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part1/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part1/alignment.cwl %}">alignment.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part1/featureCounts.cwl %}">featureCounts.cwl</a>

 {: .solution}
 
 # Scattering
 {: .solution}
 
 # Scattering


@@ -142,9 +142,9 @@ requirements:
 {: .language-yaml }
 
 > ## Part 2 solution
 {: .language-yaml }
 
 > ## Part 2 solution

-> * <a href="{% link ../assets/answers/ep5/part2/main.cwl %}">main.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part2/alignment.cwl %}">alignment.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part2/featureCounts.cwl %}">featureCounts.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part2/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part2/alignment.cwl %}">alignment.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part2/featureCounts.cwl %}">featureCounts.cwl</a>

 {: .solution}
 
 # Input parameter lists
 {: .solution}
 
 # Input parameter lists


@@ -260,7 +260,7 @@ outputs:
 {: .challenge }
 
 > ## Episode solution
 {: .challenge }
 
 > ## Episode solution

-> * <a href="{% link ../assets/answers/ep5/part4/main.cwl %}">main.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part4/alignment.cwl %}">alignment.cwl</a>
-> * <a href="{% link ../assets/answers/ep5/part4/featureCounts.cwl %}">featureCounts.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part4/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part4/alignment.cwl %}">alignment.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep5/part4/featureCounts.cwl %}">featureCounts.cwl</a>

 {: .solution}
 {: .solution}

diff --git a/_episodes/06-expressions.md b/_episodes/06-expressions.md
index 651e560cdacb3fed603fa637780a88214e743a38..d6349b1586a72af5dbed88f47f19d02c3cc0b612 100644 (file)
--- a/_episodes/06-expressions.md
+++ b/_episodes/06-expressions.md
@@ -166,8 +166,8 @@ outputs:
 {: .challenge }
 
 > ## Episode solution
 {: .challenge }
 
 > ## Episode solution

-> * <a href="{% link ../assets/answers/ep6/main.cwl %}">main.cwl</a>
-> * <a href="{% link ../assets/answers/ep6/alignment.cwl %}">alignment.cwl</a>
-> * <a href="{% link ../assets/answers/ep6/featureCounts.cwl %}">featureCounts.cwl</a>
-> * <a href="{% link ../assets/answers/ep6/subdirs.cwl %}">subdirs.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep6/main.cwl %}">main.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep6/alignment.cwl %}">alignment.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep6/featureCounts.cwl %}">featureCounts.cwl</a>
+> * <a href="{{ relative_root_path }}{% link /assets/answers/ep6/subdirs.cwl %}">subdirs.cwl</a>

 {: .solution}
 {: .solution}