Merge branch 'gh-pages' of github.com:carpentries/styles into gh-pages

[rnaseq-cwl-training.git] / Makefile

diff --git a/Makefile b/Makefile
index b585662ce1d299f5bca302fb53c12a623f9ea536..d35f08f59925c4f4cb352f424781878ed8b496fd 100644 (file)
--- a/Makefile
+++ b/Makefile
@@ -93,7 +93,7 @@ workshop-check :
 ## III. Commands specific to lesson websites
 ## =================================================
 
-.PHONY : lesson-check lesson-md lesson-files lesson-fixme
+.PHONY : lesson-check lesson-md lesson-files lesson-fixme install-rmd-deps
 
 # RMarkdown files
 RMD_SRC = $(wildcard _episodes_rmd/??-*.Rmd)
@@ -119,10 +119,15 @@ HTML_DST = \
   $(patsubst _extras/%.md,${DST}/%/index.html,$(sort $(wildcard _extras/*.md))) \
   ${DST}/license/index.html
 
+## * install-rmd-deps : Install R packages dependencies to build the RMarkdown lesson
+install-rmd-deps:
+       @${SHELL} bin/install_r_deps.sh
+
 ## * lesson-md        : convert Rmarkdown files to markdown
 lesson-md : ${RMD_DST}
 
-_episodes/%.md: _episodes_rmd/%.Rmd
+_episodes/%.md: _episodes_rmd/%.Rmd install-rmd-deps
+       @mkdir -p _episodes
        @bin/knit_lessons.sh $< $@
 
 ## * lesson-check     : validate lesson Markdown