3 These lessons go walk through the development of a CWL workflow for
6 | Lesson | Description |
7 |----------|-------------|
8 | [Lesson 1](lesson1/lesson1.md) | Turning a shell script into a workflow by composing existing tools |
9 | [Lesson 2](lesson2/lesson2.md) | Running and debugging a workflow |
10 | [Lesson 3](lesson3/lesson3.md) | Writing a tool wrapper |
11 | [Lesson 4](lesson4/lesson4.md) | Analyzing multiple samples |
12 | [Lesson 5](lesson5/lesson5.md) | Dynamic Workflow behavior with expressions |
13 | [Lesson 6](lesson6/lesson6.md) | Resources for further learning |
17 These CWL lessons are based on "Introduction to RNA-seq using
18 high-performance computing (HPC)" lessons developed by members of the
19 teaching team at the Harvard Chan Bioinformatics Core (HBC) and
22 https://github.com/hbctraining/Intro-to-rnaseq-hpc-O2
24 The original lessons are open access materials distributed under the
25 terms of the Creative Commons Attribution license (CC BY 4.0), which
26 permits unrestricted use, distribution, and reproduction in any
27 medium, provided the original author and source are credited.