projects
/
lightning.git
/ history
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅ next
Configurable chromosome name pattern.
[lightning.git]
/
exportnumpy.go
2020-11-19
Tom Clegg
Indicate low quality tile variants with -1 in numpy...
blob
|
commitdiff
|
raw
2020-11-13
Tom Clegg
Gzip gob files.
blob
|
commitdiff
|
raw
|
diff to current
2020-11-12
Tom Clegg
When not saving incomplete tilevars, still save hashes...
blob
|
commitdiff
|
raw
|
diff to current
2020-11-05
Tom Clegg
Renumber/prune variants for numpy export.
blob
|
commitdiff
|
raw
|
diff to current
2020-11-02
Tom Clegg
Adjust speed knobs.
blob
|
commitdiff
|
raw
|
diff to current
2020-11-02
Tom Clegg
Propagate filters to container.
blob
|
commitdiff
|
raw
|
diff to current
2020-11-01
Tom Clegg
Write annotations along with numpy.
blob
|
commitdiff
|
raw
|
diff to current
2020-10-31
Tom Clegg
Use tilelib to load for export and pca.
blob
|
commitdiff
|
raw
|
diff to current
2020-09-18
Tom Clegg
More logs.
blob
|
commitdiff
|
raw
|
diff to current
2020-09-17
Tom Clegg
Do PCA in Go.
blob
|
commitdiff
|
raw
|
diff to current
2020-09-15
Tom Clegg
More memory for export-numpy.
blob
|
commitdiff
|
raw
|
diff to current
2020-09-11
Tom Clegg
Option to recode as one-hot for numpy output.
blob
|
commitdiff
|
raw
|
diff to current
2020-09-09
Tom Clegg
Sort numpy output by label.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-10
Tom Clegg
Container request priority flag.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-05
Tom Clegg
Less verbose logging.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-05
Tom Clegg
I/O pipeline, show arvados container logs.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-04
Tom Clegg
Fix input arg in export.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-03
Tom Clegg
Add pca subcommand.
blob
|
commitdiff
|
raw
|
diff to current
2020-03-03
Tom Clegg
Run "filter" and "export" in arvados containers.
blob
|
commitdiff
|
raw
|
diff to current
2020-02-04
Tom Clegg
Split gvcf2numpy command into import and export-numpy.
blob
|
commitdiff
|
raw
|
diff to current