Request more memory when using mask.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@tomclegg.ca>

diff --git a/vcf2fasta.go b/vcf2fasta.go
index 382b3e15401b7a2f314eb8ee4efa1ae7bbec0997..2f02e44a28b8b9188ba8700c4ce15c88a08647c5 100644 (file)
--- a/vcf2fasta.go
+++ b/vcf2fasta.go
@@ -116,6 +116,9 @@ func (cmd *vcf2fasta) RunCommand(prog string, args []string, stdin io.Reader, st
                                },
                        },
                }
+               if cmd.mask {
+                       runner.RAM += int64(cmd.vcpus) << 31
+               }
                err = runner.TranslatePaths(&cmd.refFile, &cmd.genomeFile)
                if err != nil {
                        return 1