gob.go

   1 package main
   2
   3 import (
   4         "encoding/gob"
   5         "io"
   6         _ "net/http/pprof"
   7
   8         "golang.org/x/crypto/blake2b"
   9 )
  10
  11 type CompactGenome struct {
  12         Name     string
  13         Variants []tileVariantID
  14 }
  15
  16 type LibraryEntry struct {
  17         TagSet         [][]byte
  18         CompactGenomes []CompactGenome
  19         TileVariants   []struct {
  20                 Tag      tagID
  21                 Blake2b  [blake2b.Size]byte
  22                 Sequence []byte
  23         }
  24 }
  25
  26 func ReadCompactGenomes(rdr io.Reader) ([]CompactGenome, error) {
  27         dec := gob.NewDecoder(rdr)
  28         var ret []CompactGenome
  29         for {
  30                 var ent LibraryEntry
  31                 err := dec.Decode(&ent)
  32                 if err == io.EOF {
  33                         return ret, nil
  34                 } else if err != nil {
  35                         return nil, err
  36                 }
  37                 ret = append(ret, ent.CompactGenomes...)
  38         }
  39 }