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Merge branch '19526-manhattan-plot'
[lightning.git]
/
cwl
/
annotation
/
totalcounts.cwl
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# Copyright (C) The Lightning Authors. All rights reserved.
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#
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# SPDX-License-Identifier: AGPL-3.0
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cwlVersion: v1.1
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class: CommandLineTool
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hints:
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DockerRequirement:
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dockerPull: vcfutil
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ResourceRequirement:
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ramMin: 5000
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inputs:
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sample: string
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counts: File[]
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bashscript:
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type: File
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default:
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class: File
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location: src/totalcounts.sh
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outputs:
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summary:
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type: stdout
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arguments:
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- $(inputs.bashscript)
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- $(inputs.counts)
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stdout: $(inputs.sample)_summary.txt