Allow importing all-hom (reference) data from single fasta file.

[lightning.git] / testdata / pipeline1 / input1.1.fasta

>chr1
ggcgtctacctcgagaagccccgacctctgaataagatctaagaacatctcaagggattgtgtatcttgttgggtgtacgcgcgccagcccgcagcatta
ggagaactgtgctccgccttcaga
ccccttgggtaaaatgccgcgcaatatgttgattacacttgctgcccatctgaaaggtcgccttatcaatcctatgctgaatgccctctaaggagtt
acacatgctagcgcgtcggggtgg
tcgccgcatgggacatgttggggtcccgtagctccggtcgatgtaggcacgcgttttgccgaggagatagatcatcagctgacctatagattcgtctgtc
gactctagcagagtggccagccac
aaggtttatattcagtcgaaatggacgggtcccgaacttgcacggacctaacgggactcgcctttcgtaataaccgaacctctaggccgccgcgagatca
cctcccgagccgagccacccgtca
tgatagccatcccgcacctagcgcacggaacttcgaccgatcccatattaacgtgtctcttatcctcccgctactgcgtgccttgccactcgtttactat
>chr2
tttttatagcagtagcggttgcgataatgcgcactaaggtggccataacttagccacacagactgcgacctcggtgtcaatctttaggcgatgactagtg
gttattaataataacttatcatca
cttccggggaaactagcgtaaaaaccgccgtcgcagtataccaccttatacctgtgccactcaatacaggagttgctcagcccaagacaccaacgactaa
gctctcaaaccttgtatttttctt
atgtcctcgcttggattatggggactcgcagtaaatgacaaccgtgcccgctggccctggccggaccgcgcgtccgtaagtagcgatcgagtcctgcagt
aaaactgatccaaaaaaaatacaa
acaccacgtttataccctgttgagtcgccacgtaacgtattaacgtatgaacggcccggttttcttatctcgcaccgctagtttgccctggcggtcg
cctatgagtcaatcctattttcaa
gatgagtatgtataaggcggcctgtcacgtgaaacctaggatacccaggtacctagggtcatttgctccccgttccccgcggcggacatccgaatatatc