cwl/gvcf2fasta/yml/gvcf2fasta-wf-test.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 sampleid: "HG00551.haplotypeCalls.er.raw"
   6 vcf:
   7   class: File
   8   location: keep:3c41c90c022a9307ffa905426b04096b+5179901/HG00551.haplotypeCalls.er.raw.vcf.gz
   9 gqcutoff: 20
  10 genomebed:
  11   class: File
  12   location: keep:67b4d7e55e61cef7343f3928af97e197+54/hg38.bed
  13 ref:
  14   class: File
  15   location: keep:ee5b90cf2d5f3573e6d455ab56e15cdf+761/hg38.fa.gz