cwl/preprocess/cgivar/yml/cgivar2vcfbed-wf-test.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 cgivar:
   6   class: File
   7   location: keep:c9262dd71f8421735b3dde4e1b5b342f+86993/hu011C57_var-GS000015172-ASM.tsv.bz2
   8 sample: "hu011C57_var-GS000015172-ASM"
   9 reference:
  10   class: File
  11   location: keep:320d7a6717aa7b555a09e52976ba4a02+18534/build37.crr
  12 cgascript:
  13   class: File
  14   location: ../cgatools-mkvcf.sh
  15 fixscript:
  16   class: File
  17   location: ../fix_vcf.py