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Merge branch '21543-lightning-subdir'
[lightning.git]
/
cwl
/
preprocess
/
cgivar
/
cgatools-mkvcf.sh
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# Copyright (C) The Lightning Authors. All rights reserved.
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#
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# SPDX-License-Identifier: AGPL-3.0
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#!/bin/sh
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REFERENCE=$1
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CGIVAR=$2
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cgatools mkvcf --beta --reference $REFERENCE --include-no-calls --field-names GT,GQ,DP,AD --source-names masterVar --master-var $CGIVAR || true