cwl/annotation/yml/snpeff-bcftools-annotate-annotation_chr19_new.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 vcf:
   6   class: File
   7   location: keep:42c61d54769fec3e54b73901c817c16c+10426/annotations.chr19.vcf
   8 sample: "annotations.chr19"
   9 snpeffdatadir:
  10   class: Directory
  11   location: keep:66c966928931de252274772c76f73025+52054
  12 genomeversion: "GRCh38.86"
  13 dbsnp:
  14   class: File
  15   location: keep:a088b297d614e4c63cbb23f8ad404438+12313/00-All.vcf.gz_renamed.bcf
  16 gnomad:
  17   class: File
  18   location: keep:c6a8fc877e85d73ac5b165e2d7367e26+675135/gnomad.genomes.v3.1.2.sites.chr19.bcf