cwl/comparevcf/yml/comparevcf-original-lightning-wf-A-PRHS-PR000971-BL-COL-47620BL1.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 sampleid: "A-PRHS-PR000971-BL-COL-47620BL1"
   6 vcf:
   7   class: File
   8   location: keep:ebd528706c3192b77e56ebe93361194e+553/A-PRHS-PR000971-BL-COL-47620BL1_varonly.vcf.gz
   9 nocallbed:
  10   class: File
  11   location: keep:ebd528706c3192b77e56ebe93361194e+553/A-PRHS-PR000971-BL-COL-47620BL1_nocall.bed
  12 lightningvcf:
  13   class: File
  14   location: keep:4626bd8ca6b3ed8f1ef32dfd46815505+378/GRCh38.86_library_snpeff_dbsnp_gnomad.vcf.gz
  15 sdf:
  16   class: Directory
  17   location: keep:88c64c60daf829f30187fbcb423a46fc+1355/hg38
  18 bashscript:
  19   class: File
  20   location: ../src/change-GT.sh
  21 header:
  22   class: File
  23   location: keep:73394b577d9109cd266f5facfbd1e000+54/header