cwl/gvcf2fasta/yml/untar-concat-get_bed_varonlyvcf-test.yml

   1 # Copyright (C) The Lightning Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: AGPL-3.0
   4
   5 sampleid: "A-WCAP-WC000711-BL-COL-39141BL1"
   6 vcftar:
   7   class: File
   8   location: keep:9b09803eb9ccd2b31d4db4ce80ed7a03+5003343/A-WCAP-WC000711-BL-COL-39141BL1_vcpa1.0_gatk_GRU-IRB-PUB.gvcf.tar.gz
   9 gqcutoff: 20
  10 genomebed:
  11   class: File
  12   location: keep:67b4d7e55e61cef7343f3928af97e197+54/hg38.bed