Peter Amstutz [Thu, 25 Apr 2019 14:04:04 +0000 (10:04 -0400)]
Change arvados-python-client to >=1.3.1, <=1.3.99
refs #15080
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Fernando Monserrat [Thu, 7 Mar 2019 14:52:25 +0000 (11:52 -0300)]
refs #14891 .Merge branch '14891-upload-to-testing-repo'
Arvados-DCO-1.1-Signed-off-by: Fernando Monserrat <fmonserrat@veritasgenetics.com>
Tom Clegg [Wed, 24 Apr 2019 20:42:06 +0000 (16:42 -0400)]
Merge branch '15112-save-lost-blocks-file'
refs #15112
refs #15148
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 18:52:39 +0000 (14:52 -0400)]
15112: Update structure.sql for last migration.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 15:28:50 +0000 (11:28 -0400)]
15112: Fill in missing modified_at values from before #14595.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Thu, 13 Dec 2018 20:08:53 +0000 (15:08 -0500)]
14595: Fix comment.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 13 Dec 2018 19:37:29 +0000 (14:37 -0500)]
14595: Add leave_modified_at_alone
leave_modified_by_user_alone does not affect modified_at
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 22 Apr 2019 07:06:18 +0000 (03:06 -0400)]
15112: Refuse to run if modified_at column has any nulls.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Wed, 10 Apr 2019 19:38:55 +0000 (16:38 -0300)]
Merge branch '15080-acr131-deps-fix' into 1.3-dev
Refs #15080
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 10 Apr 2019 17:58:09 +0000 (14:58 -0300)]
15080: Changes open-ended dependency on arvados python client.
Avoid making a-c-r indirectly ask for ciso8601 >= 2.0.0 by pinning
the arvados python client dep version to 1.3.1
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 19 Feb 2019 19:50:36 +0000 (16:50 -0300)]
14860: Fixes bug by assigning the signed manifest text to the snapshot being saved.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 19 Feb 2019 18:24:46 +0000 (15:24 -0300)]
14860: Exposes the bug with a new test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Ward Vandewege [Sun, 20 Jan 2019 18:12:45 +0000 (13:12 -0500)]
9945: there is a new rvm gpg key
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Mon, 11 Feb 2019 21:10:47 +0000 (16:10 -0500)]
Make sure to bump the dependency on the arvados gems to the 1.3 series.
refs #14559
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 11 Feb 2019 18:05:34 +0000 (13:05 -0500)]
14826: Fix copy and paste error
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 11 Feb 2019 15:57:45 +0000 (10:57 -0500)]
14826: API server looks in CA cert path that works on CentOS
API server makes callbacks to remote clusters to validate remote
users, ensure it has the right system CA cert path to validate TLS
certs of remote clusters.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 29 Jan 2019 22:48:15 +0000 (19:48 -0300)]
14738: Replaces double with single quotes for code style.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 29 Jan 2019 20:39:26 +0000 (17:39 -0300)]
14738: Enhances code readability when concatenating strings.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 29 Jan 2019 19:25:02 +0000 (16:25 -0300)]
14738: Fixes the double-slash usage on requests to prevent 301 from controller
When a request is made to controller using double slashes, for example to
http://apiserver//arvados/v1/collections, arvados controller returns a 301
that breaks CORS.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 24 Jan 2019 18:48:54 +0000 (15:48 -0300)]
14770: Fixes parameter on acr call.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:57:45 +0000 (15:57 -0500)]
14593: Fix typo.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:43:16 +0000 (15:43 -0500)]
14593: Add note about broken crunch1 to upgrade docs.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:03:04 +0000 (15:03 -0500)]
14593: Fix a-c-r when running on the "jobs" API
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 19:59:27 +0000 (14:59 -0500)]
Merge branch '14584-runtime-user-reuse' refs #14584
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 19:18:54 +0000 (14:18 -0500)]
14584: Remove runtime_user_uuid and runtime_auth_scopes checks for reuse.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 18:16:33 +0000 (13:16 -0500)]
Merge branch '14583-no-dcpdh' refs #14583
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 16:42:43 +0000 (11:42 -0500)]
14583: Delete arv:dockerCollectionPDH from DockerRequirement in RunInSingleContainer
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 4 Dec 2018 20:51:13 +0000 (17:51 -0300)]
Merge branch '14551-wb-login-as-token'
Closes #14551
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:32:59 +0000 (11:32 -0500)]
Merge branch '14574-thread-count-1' refs #14574
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:32:49 +0000 (11:32 -0500)]
Merge branch '14576-query-perf' refs #14576
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:17:12 +0000 (11:17 -0500)]
14576: Use the 'in' test for user queries
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 15:43:01 +0000 (10:43 -0500)]
14576: Adjust query for admins that filters out trashed items
refs #14576
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 15:43:01 +0000 (10:43 -0500)]
14576: Adjust query for admins that filters out trashed items
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Tue, 4 Dec 2018 13:58:36 +0000 (08:58 -0500)]
Fix docker push command in run-build-docker-jobs-image.sh
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Mon, 3 Dec 2018 21:29:24 +0000 (16:29 -0500)]
If a version tag is passed to run-build-docker-jobs-image.sh, actually use that
version of our codebase for the packages installed in the image.
run-build-docker-jobs-image.sh now also supports our ARVADOS_BUILDING_VERSION
and ARVADOS_BUILDING_ITERATION mechanism, so versions can be overridden that
way.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 3 Dec 2018 21:23:28 +0000 (16:23 -0500)]
14574: Default --thread-count=1 until threading is more fully baked.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 3 Dec 2018 17:00:39 +0000 (12:00 -0500)]
14560: Limit to_tsvector input to 8K.
refs #14560
refs #13752
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Sun, 2 Dec 2018 02:09:40 +0000 (21:09 -0500)]
Merge branch '14560-tsvector-too-long' refs #14560
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Sat, 1 Dec 2018 21:11:28 +0000 (16:11 -0500)]
14560: Only index the first 1M bytes of ft-searchable data.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 21:04:06 +0000 (16:04 -0500)]
Merge branch '14558-cwl-pkg-deps' refs #14558
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 20:32:27 +0000 (15:32 -0500)]
14558: Version dependency fixes.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 16:58:20 +0000 (11:58 -0500)]
Merge branch '14510-cwl-perf' refs #14510
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 15:50:20 +0000 (10:50 -0500)]
14510: Bugfix order of precedence for setting collection cache size
Fix a couple other buggy tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 14:25:47 +0000 (09:25 -0500)]
14510: Don't initialize workflow redundantly.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Fri, 30 Nov 2018 02:08:05 +0000 (21:08 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo, not
the latest tag on the master branch (part 3). Make sure the change also works
in Python 3.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 19:49:31 +0000 (14:49 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo,
not the latest tag on the master branch (part 2).
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Lucas Di Pentima [Thu, 29 Nov 2018 14:06:54 +0000 (11:06 -0300)]
14551: Uses v2 token to log in as a user.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 29 Nov 2018 16:27:16 +0000 (13:27 -0300)]
14551: Test exposing the bug.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 14:27:59 +0000 (09:27 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo,
not the latest tag on the master branch.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 03:23:34 +0000 (22:23 -0500)]
Work around ruamel.yaml packaging issue.
closes #14552
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 20:12:19 +0000 (15:12 -0500)]
Stop relying on the keyservers during arvbox docker image build, they are too
unreliable.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Wed, 28 Nov 2018 19:42:06 +0000 (14:42 -0500)]
14510: Set collection metadata cache size as 150% of sum of inputs
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 19:19:23 +0000 (14:19 -0500)]
Release 1.2.1 does not require special attention when upgrading.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:32:11 +0000 (13:32 -0500)]
Merge branch '14345-add-webdav-user-doc'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:29:43 +0000 (13:29 -0500)]
Merge branch 'master' into 14345-add-webdav-user-doc
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:29:14 +0000 (13:29 -0500)]
14345: Some more language tweaks.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Morris [Wed, 28 Nov 2018 18:19:00 +0000 (13:19 -0500)]
Add OS X description & tweak Windows
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:12:34 +0000 (13:12 -0500)]
14535: fix typos.
refs #14535
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 16:40:53 +0000 (11:40 -0500)]
Add user documentation for accessing Keep from Windows.
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 23:13:30 +0000 (18:13 -0500)]
14510: Estimate collection cache size wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 22:26:07 +0000 (17:26 -0500)]
14510: Update tests/docs for --collection-cache-size
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 20:53:07 +0000 (15:53 -0500)]
14510: Setting collection cache wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 19:33:53 +0000 (14:33 -0500)]
14510: Perfomance fixes
* Add --collection-cache to enable users to workaround cache thrashing
* Limit task queue size. Release workflow lock when attempting to
enqueue a task (which now may block).
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 20:54:37 +0000 (15:54 -0500)]
Restore default value of --on-error to 'continue' refs #14440
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 19:18:31 +0000 (14:18 -0500)]
Merge branch '14440-fed-user-doc' refs #14440
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 19:14:54 +0000 (14:14 -0500)]
14440: Fix formatting of cwl-run-options table.
Also expand help text of --on-error option a bit.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 18:15:18 +0000 (13:15 -0500)]
Merge branch '14535-ruamel-dependencies'
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 18:06:36 +0000 (13:06 -0500)]
14535: bumping package revision up for python-ruamel.yaml
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 17:47:11 +0000 (12:47 -0500)]
14440: Refresh cwl-run-options, add note about dockerCollectionPDH
Also add note about workbench not displaying remote steps.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 16:27:44 +0000 (11:27 -0500)]
14535: add dependencies for ruamel.yaml
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Lucas Di Pentima [Mon, 26 Nov 2018 19:43:29 +0000 (16:43 -0300)]
Merge branch '14519-wb-textile-issues'
Closes #14519
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 26 Nov 2018 19:42:11 +0000 (16:42 -0300)]
14519: Adds more table related tags to the whitelist
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 21 Nov 2018 22:32:23 +0000 (19:32 -0300)]
14519: Fixes bug by adding table tags to the sanitizer white list
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 21 Nov 2018 22:31:51 +0000 (19:31 -0300)]
14519: Test exposing the regression
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 17:37:07 +0000 (12:37 -0500)]
14440: Add discussion of federation features.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:24:31 +0000 (16:24 -0500)]
14440: Federated workflow diagram.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:23:59 +0000 (16:23 -0500)]
14440: Comments on how federated.cwl works
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:46:06 +0000 (14:46 -0500)]
14440: Add project
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 18:42:38 +0000 (13:42 -0500)]
14440: Add project_uuid to ClusterTarget example
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 16:33:40 +0000 (11:33 -0500)]
14440: Federated workflow docs WIP
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 22:20:52 +0000 (17:20 -0500)]
14440: Working on docs for federated workflows.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 15:42:02 +0000 (10:42 -0500)]
Merge branch '14198-make-builder' refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 15:13:39 +0000 (10:13 -0500)]
14198: Restore behavior of creating an empty Builder object
Used for do_eval() on set_cluster_target(). Calling _init_job() turns
out to have some unintended side effects as well as doing redundant
work.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:39:59 +0000 (16:39 -0500)]
Finish fixing setting project_uuid from runtimeContext, fix tests.
refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:46:38 +0000 (14:46 -0500)]
Fix ClusterTarget.project_uuid to correctly set the project uuid
refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:44:23 +0000 (14:44 -0500)]
Merge branch '14345-nginx-proxy-request-buffering'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:34:17 +0000 (14:34 -0500)]
14345: Disable proxy request buffering in Nginx keepproxy example.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:14:04 +0000 (14:14 -0500)]
14345: Disable Nginx proxy request buffering for keep-web requests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:00:04 +0000 (14:00 -0500)]
Fix --submit-runner-cluster tests refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 18:28:00 +0000 (13:28 -0500)]
Merge branch '14345-proppatch'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 18:06:00 +0000 (13:06 -0500)]
Merge branch '14198-fed-testing' refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 17:41:11 +0000 (12:41 -0500)]
14198: Call validate_cluster_target on --submit-runner-cluster
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 22:26:17 +0000 (17:26 -0500)]
14198: Add check for uuidPrefix if local cluster isn't in the remoteHosts.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 18:30:40 +0000 (13:30 -0500)]
14198: Update build.list for latest cwltool/schema-salad
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 19 Nov 2018 20:05:01 +0000 (15:05 -0500)]
14198: Fix secondaryFile tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Sat, 17 Nov 2018 03:01:45 +0000 (22:01 -0500)]
14198: Tests for hints in different places
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 16 Nov 2018 21:39:09 +0000 (16:39 -0500)]
14198: Tests prefer setting ClusterTarget hint on the workflow step.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 16 Nov 2018 21:18:19 +0000 (16:18 -0500)]
14198: Test cases for places that ClusterTarget can appear
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 16 Nov 2018 15:59:52 +0000 (10:59 -0500)]
14198: Set ClusterTarget hint on steps instead of tools
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 14 Nov 2018 19:44:19 +0000 (14:44 -0500)]
14198: Rewrite README
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
projects / arvados.git / log