arvados.git
9 years ago3016: Rollback firstscript tutorial update for search_for details. Tom said we will... 3016-pipeline-template-search-string
radhika [Thu, 31 Jul 2014 17:25:54 +0000 (13:25 -0400)]
3016: Rollback firstscript tutorial update for search_for details. Tom said we will keep this tutorial simple.

9 years ago3016: add detais about search_for in the firstscript tutorial
radhika [Thu, 31 Jul 2014 16:27:02 +0000 (12:27 -0400)]
3016: add detais about search_for in the firstscript tutorial

9 years agorefs #3016
radhika [Wed, 30 Jul 2014 21:35:29 +0000 (17:35 -0400)]
refs #3016
Merge branch '3016-pipeline-template-search-string'

9 years agoMerge branch 'master' into 3016-pipeline-template-search-string
radhika [Wed, 30 Jul 2014 21:34:51 +0000 (17:34 -0400)]
Merge branch 'master' into 3016-pipeline-template-search-string

9 years agoMerge branch '3425-truncated-output' closes #3425
Tom Clegg [Wed, 30 Jul 2014 20:30:00 +0000 (16:30 -0400)]
Merge branch '3425-truncated-output' closes #3425

9 years ago3425: Smaller buffer.
Tom Clegg [Wed, 30 Jul 2014 20:28:53 +0000 (16:28 -0400)]
3425: Smaller buffer.

9 years agoMerge branch '3349-install-docs' closes #3349
Tom Clegg [Wed, 30 Jul 2014 20:19:36 +0000 (16:19 -0400)]
Merge branch '3349-install-docs' closes #3349

9 years ago3425: When reading from arv-get, repeat sysread until error or eof.
Tom Clegg [Wed, 30 Jul 2014 20:17:49 +0000 (16:17 -0400)]
3425: When reading from arv-get, repeat sysread until error or eof.

9 years agocloses #3065
radhika [Wed, 30 Jul 2014 20:09:49 +0000 (16:09 -0400)]
closes #3065
Merge branch '2985-selection-button-move-copy'

9 years ago3349: More example/default config cleanup.
Tom Clegg [Wed, 30 Jul 2014 20:03:19 +0000 (16:03 -0400)]
3349: More example/default config cleanup.

9 years ago2985: let error propagate during save
radhika [Wed, 30 Jul 2014 20:02:25 +0000 (16:02 -0400)]
2985: let error propagate during save

9 years ago2985: let errors propagate during save
radhika [Wed, 30 Jul 2014 19:57:30 +0000 (15:57 -0400)]
2985: let errors propagate during save

9 years ago3349: Merge branch 'master' into 3349-install-docs
Tom Clegg [Wed, 30 Jul 2014 19:56:46 +0000 (15:56 -0400)]
3349: Merge branch 'master' into 3349-install-docs

9 years agoMerge branch 'master' into 2985-selection-button-move-copy
radhika [Wed, 30 Jul 2014 19:43:51 +0000 (15:43 -0400)]
Merge branch 'master' into 2985-selection-button-move-copy

9 years agoMerge branch 'master' into 2985-selection-button-move-copy
radhika [Wed, 30 Jul 2014 19:01:07 +0000 (15:01 -0400)]
Merge branch 'master' into 2985-selection-button-move-copy

9 years agoWorkbench: make the Setup User screen less confusing by labelling the
Ward Vandewege [Wed, 30 Jul 2014 19:00:49 +0000 (21:00 +0200)]
Workbench: make the Setup User screen less confusing by labelling the
Repository Name and Shell Login field as such.

no issue #

9 years ago3016: prefill input search with value configured in the template
radhika [Wed, 30 Jul 2014 18:16:51 +0000 (14:16 -0400)]
3016: prefill input search with value configured in the template

9 years ago3016: Update per Tom's review feedback.
radhika [Wed, 30 Jul 2014 16:04:11 +0000 (12:04 -0400)]
3016: Update per Tom's review feedback.

9 years agoMerge branch 'master' into 3016-pipeline-template-search-string
radhika [Wed, 30 Jul 2014 15:36:55 +0000 (11:36 -0400)]
Merge branch 'master' into 3016-pipeline-template-search-string

9 years agoReport validation error messages in server log. refs #3415
Tom Clegg [Wed, 30 Jul 2014 14:35:09 +0000 (10:35 -0400)]
Report validation error messages in server log. refs #3415

9 years agoDocumentation fix: add a link to the Keep installation page in the left
Ward Vandewege [Tue, 29 Jul 2014 21:54:43 +0000 (23:54 +0200)]
Documentation fix: add a link to the Keep installation page in the left
nav bar under "Manual installation".

no issue #

9 years agoWhitespace fix in docker install documentation.
Ward Vandewege [Tue, 29 Jul 2014 21:48:38 +0000 (23:48 +0200)]
Whitespace fix in docker install documentation.

no issue #

9 years agoMerge branch '3219-further-docker-improvements'
Ward Vandewege [Tue, 29 Jul 2014 20:34:14 +0000 (22:34 +0200)]
Merge branch '3219-further-docker-improvements'

refs #3219

9 years agoMerge branch 'master' into 3219-further-docker-improvements
Ward Vandewege [Tue, 29 Jul 2014 20:32:56 +0000 (22:32 +0200)]
Merge branch 'master' into 3219-further-docker-improvements

9 years ago3016: schema doc updated with new search_for attribute details.
radhika [Tue, 29 Jul 2014 17:25:45 +0000 (13:25 -0400)]
3016: schema doc updated with new search_for attribute details.

9 years agoMerge branch '3351-keep-timeout' closes #3351
Tom Clegg [Tue, 29 Jul 2014 15:58:45 +0000 (11:58 -0400)]
Merge branch '3351-keep-timeout' closes #3351

9 years ago2985: forgot to use ruby's cool syntax
radhika [Tue, 29 Jul 2014 15:03:37 +0000 (11:03 -0400)]
2985: forgot to use ruby's cool syntax

9 years ago2985: pass move items only when available
radhika [Tue, 29 Jul 2014 14:38:33 +0000 (10:38 -0400)]
2985: pass move items only when available

9 years ago3351: Propagate caller-provided timeout from KeepClient to KeepWriterThread.
Tom Clegg [Tue, 29 Jul 2014 14:35:26 +0000 (10:35 -0400)]
3351: Propagate caller-provided timeout from KeepClient to KeepWriterThread.

Also, use the timeout in the sign_for_old_server block (even though
this branch is unlikely to be used in real life now that the old Keep
server has been replaced).

9 years agoMerge branch 'master' into 2985-selection-button-move-copy
radhika [Tue, 29 Jul 2014 14:28:06 +0000 (10:28 -0400)]
Merge branch 'master' into 2985-selection-button-move-copy

Conflicts:
apps/workbench/config/routes.rb

9 years ago3235: Fix attribute keys. refs #3235
Tom Clegg [Tue, 29 Jul 2014 14:00:03 +0000 (10:00 -0400)]
3235: Fix attribute keys. refs #3235

9 years agoMerge branch '3235-top-nav-site-search' refs #3235
Tom Clegg [Tue, 29 Jul 2014 02:50:37 +0000 (22:50 -0400)]
Merge branch '3235-top-nav-site-search' refs #3235

9 years agoDo not show non-project groups in groups directory. no issue #
Tom Clegg [Tue, 29 Jul 2014 01:18:40 +0000 (21:18 -0400)]
Do not show non-project groups in groups directory. no issue #

9 years agoFix TypeError: Got an unexpected keyword argument "uuid". refs #3235
Tom Clegg [Tue, 29 Jul 2014 01:14:33 +0000 (21:14 -0400)]
Fix TypeError: Got an unexpected keyword argument "uuid". refs #3235

9 years ago3235: Fix hover highlighting on projects dropdowns.
Tom Clegg [Tue, 29 Jul 2014 00:30:10 +0000 (20:30 -0400)]
3235: Fix hover highlighting on projects dropdowns.

9 years ago3235: Show selected project in project-filter dropdown title.
Tom Clegg [Tue, 29 Jul 2014 00:12:42 +0000 (20:12 -0400)]
3235: Show selected project in project-filter dropdown title.

9 years agoDo not return non-project groups in groups#contents. refs #3235
Tom Clegg [Mon, 28 Jul 2014 23:23:04 +0000 (19:23 -0400)]
Do not return non-project groups in groups#contents. refs #3235

9 years agoMerge branch 'master' into 3219-further-docker-improvements
Ward Vandewege [Mon, 28 Jul 2014 22:46:15 +0000 (00:46 +0200)]
Merge branch 'master' into 3219-further-docker-improvements

9 years agoFix the auto_admin_user feature; it was broken by accident in
Ward Vandewege [Mon, 28 Jul 2014 22:43:14 +0000 (00:43 +0200)]
Fix the auto_admin_user feature; it was broken by accident in
commit:5f651773

refs #3219

9 years ago3235: Fix infinite scroll broken by merge.
Tom Clegg [Mon, 28 Jul 2014 21:52:51 +0000 (17:52 -0400)]
3235: Fix infinite scroll broken by merge.

9 years ago3235: Move filter-by-project to left side.
Tom Clegg [Mon, 28 Jul 2014 21:20:38 +0000 (17:20 -0400)]
3235: Move filter-by-project to left side.

9 years ago3235: Merge branch 'master' into 3235-top-nav-site-search
Tom Clegg [Mon, 28 Jul 2014 21:12:52 +0000 (17:12 -0400)]
3235: Merge branch 'master' into 3235-top-nav-site-search

Conflicts:
apps/workbench/app/views/layouts/application.html.erb

9 years agoMerge branch '3235-all-contents' refs #3235
Tom Clegg [Mon, 28 Jul 2014 21:10:16 +0000 (17:10 -0400)]
Merge branch '3235-all-contents' refs #3235

9 years ago3235: Add test case.
Tom Clegg [Fri, 25 Jul 2014 17:49:27 +0000 (13:49 -0400)]
3235: Add test case.

9 years ago3235: Fix SQL query.
Tom Clegg [Fri, 25 Jul 2014 02:10:30 +0000 (22:10 -0400)]
3235: Fix SQL query.

9 years ago3235: Split GroupsController#contents logic out to load_searchable_objects.
Tom Clegg [Thu, 24 Jul 2014 23:03:35 +0000 (19:03 -0400)]
3235: Split GroupsController#contents logic out to load_searchable_objects.

9 years ago3235: Remove errant action exemption.
Tom Clegg [Mon, 28 Jul 2014 19:56:41 +0000 (15:56 -0400)]
3235: Remove errant action exemption.

9 years ago3235: Merge branch 'master' into 3235-top-nav-site-search
Tom Clegg [Mon, 28 Jul 2014 19:45:23 +0000 (15:45 -0400)]
3235: Merge branch 'master' into 3235-top-nav-site-search

Conflicts:
apps/workbench/app/assets/javascripts/infinite_scroll.js
apps/workbench/app/views/application/_choose.html.erb
apps/workbench/app/views/layouts/application.html.erb

9 years agoMerge branch 'master' into 2985-selection-button-move-copy
radhika [Mon, 28 Jul 2014 18:22:27 +0000 (14:22 -0400)]
Merge branch 'master' into 2985-selection-button-move-copy

9 years ago2985: fix typo
radhika [Mon, 28 Jul 2014 18:22:01 +0000 (14:22 -0400)]
2985: fix typo

9 years agoSet $CRUNCH_SRC correctly when running the Docker container. refs #3370
Peter Amstutz [Mon, 28 Jul 2014 13:13:59 +0000 (09:13 -0400)]
Set $CRUNCH_SRC correctly when running the Docker container.  refs #3370

9 years ago2985: move selections to chosen project
radhika [Mon, 28 Jul 2014 01:55:06 +0000 (21:55 -0400)]
2985: move selections to chosen project

9 years ago2985: move selection items to the chosen project
radhika [Mon, 28 Jul 2014 01:46:44 +0000 (21:46 -0400)]
2985: move selection items to the chosen project

9 years ago3235: Bind Esc key to close modals.
Tom Clegg [Sun, 27 Jul 2014 22:35:46 +0000 (18:35 -0400)]
3235: Bind Esc key to close modals.

9 years ago3235: Focus search box when chooser modal appears.
Tom Clegg [Sun, 27 Jul 2014 22:28:18 +0000 (18:28 -0400)]
3235: Focus search box when chooser modal appears.

9 years ago3235: Show project filter by default (i.e., unless by_project=false).
Tom Clegg [Sun, 27 Jul 2014 22:22:53 +0000 (18:22 -0400)]
3235: Show project filter by default (i.e., unless by_project=false).

9 years ago3235: Fix "no filter / all projects" option.
Tom Clegg [Sun, 27 Jul 2014 22:03:13 +0000 (18:03 -0400)]
3235: Fix "no filter / all projects" option.

9 years ago3235: Fix multiple-select.
Tom Clegg [Sun, 27 Jul 2014 21:58:17 +0000 (17:58 -0400)]
3235: Fix multiple-select.

9 years ago3235: Make filter-by-project play nice with infinite scroll.
Tom Clegg [Sun, 27 Jul 2014 21:48:28 +0000 (17:48 -0400)]
3235: Make filter-by-project play nice with infinite scroll.

9 years ago3235: Hide section header rows for empty sections. closes #3377
Tom Clegg [Sun, 27 Jul 2014 19:34:31 +0000 (15:34 -0400)]
3235: Hide section header rows for empty sections. closes #3377

9 years ago3235: Fix infinite scroll in Search chooser.
Tom Clegg [Sun, 27 Jul 2014 19:22:38 +0000 (15:22 -0400)]
3235: Fix infinite scroll in Search chooser.

9 years ago3235: Infinite scroll error handling: Show error message and "Retry" button
Tom Clegg [Sun, 27 Jul 2014 19:19:49 +0000 (15:19 -0400)]
3235: Infinite scroll error handling: Show error message and "Retry" button
instead of immediately repeating the failed request ad infinitum.

9 years ago3235: Skip data-remote links in smoke test. They might not know format=html.
Tom Clegg [Sat, 26 Jul 2014 21:23:42 +0000 (17:23 -0400)]
3235: Skip data-remote links in smoke test. They might not know format=html.

9 years ago3235: Show multiple object types in top-nav Search modal.
Tom Clegg [Sat, 26 Jul 2014 21:08:45 +0000 (17:08 -0400)]
3235: Show multiple object types in top-nav Search modal.

9 years ago3351: Fix CollectionReader usage in arv-ls.
Tom Clegg [Sat, 26 Jul 2014 18:53:17 +0000 (14:53 -0400)]
3351: Fix CollectionReader usage in arv-ls.

9 years ago3351: Add comment about SSL timeouts.
Tom Clegg [Sat, 26 Jul 2014 18:51:19 +0000 (14:51 -0400)]
3351: Add comment about SSL timeouts.

9 years ago3351: Clean up some excess indentation.
Tom Clegg [Sat, 26 Jul 2014 18:49:02 +0000 (14:49 -0400)]
3351: Clean up some excess indentation.

9 years ago3351: Catch SSLError and show warning instead of stack trace.
Tom Clegg [Sat, 26 Jul 2014 18:48:13 +0000 (14:48 -0400)]
3351: Catch SSLError and show warning instead of stack trace.

9 years ago3351: Retry failed threads (servers) if replication is too low after one pass.
Tom Clegg [Sat, 26 Jul 2014 18:17:43 +0000 (14:17 -0400)]
3351: Retry failed threads (servers) if replication is too low after one pass.

9 years agoMerge branch 'master' into 2985-selection-button-move-copy
radhika [Sat, 26 Jul 2014 03:07:06 +0000 (23:07 -0400)]
Merge branch 'master' into 2985-selection-button-move-copy

9 years agorefs #3138
radhika [Sat, 26 Jul 2014 01:34:42 +0000 (21:34 -0400)]
refs #3138
Merge branch '3138-wiselinks'

9 years ago3138: test passing as is
radhika [Sat, 26 Jul 2014 01:33:50 +0000 (21:33 -0400)]
3138: test passing as is

9 years agoMerge branch 'master' into 3138-wiselinks
radhika [Sat, 26 Jul 2014 01:24:04 +0000 (21:24 -0400)]
Merge branch 'master' into 3138-wiselinks

Conflicts:
apps/workbench/app/views/layouts/application.html.erb

9 years ago3351: Improve "already uploading" message (and send to stderr, not stdout).
Tom Clegg [Fri, 25 Jul 2014 22:42:18 +0000 (18:42 -0400)]
3351: Improve "already uploading" message (and send to stderr, not stdout).

9 years ago3351: Do not use resume cache at all if --no-resume flag is given.
Tom Clegg [Fri, 25 Jul 2014 22:36:38 +0000 (18:36 -0400)]
3351: Do not use resume cache at all if --no-resume flag is given.

9 years agoMerge branch 'master' into 3138-wiselinks
radhika [Fri, 25 Jul 2014 21:56:51 +0000 (17:56 -0400)]
Merge branch 'master' into 3138-wiselinks

9 years ago3138: When wiselinks is initialized, selection.js does not work. Since we want to...
radhika [Fri, 25 Jul 2014 21:55:41 +0000 (17:55 -0400)]
3138: When wiselinks is initialized, selection.js does not work. Since we want to stop using selection.js in the near future, let's not initialize wiselinks object for now.

9 years ago3351: Set PUT request timeout to 60 seconds.
Tom Clegg [Fri, 25 Jul 2014 21:42:43 +0000 (17:42 -0400)]
3351: Set PUT request timeout to 60 seconds.

9 years agoMerge branch '3286-home-button' closes #3286
Tom Clegg [Fri, 25 Jul 2014 20:22:54 +0000 (16:22 -0400)]
Merge branch '3286-home-button' closes #3286

9 years ago3286: Split Home/Projects thing into Home button and Projects dropdown.
Tom Clegg [Fri, 25 Jul 2014 19:26:31 +0000 (15:26 -0400)]
3286: Split Home/Projects thing into Home button and Projects dropdown.

9 years agoDo not remove /dev/stdout on interrupt signal. No issue #
Tom Clegg [Fri, 25 Jul 2014 17:51:51 +0000 (13:51 -0400)]
Do not remove /dev/stdout on interrupt signal. No issue #

9 years ago3235: Add test case.
Tom Clegg [Fri, 25 Jul 2014 17:49:27 +0000 (13:49 -0400)]
3235: Add test case.

9 years agoMerge branch 'staging'
Brett Smith [Fri, 25 Jul 2014 12:04:33 +0000 (08:04 -0400)]
Merge branch 'staging'

Closes #3315.  Thanks Guillermo!

9 years agoCreate temporary directory if it does not exist
Guillermo Carrasco [Wed, 9 Jul 2014 19:02:27 +0000 (15:02 -0400)]
Create temporary directory if it does not exist

9 years ago3235: Fix SQL query.
Tom Clegg [Fri, 25 Jul 2014 02:10:30 +0000 (22:10 -0400)]
3235: Fix SQL query.

9 years ago3349: Do not override working "test" defaults in example config.
Tom Clegg [Fri, 25 Jul 2014 01:47:43 +0000 (21:47 -0400)]
3349: Do not override working "test" defaults in example config.

9 years ago3349: Add default blob_signing_key for test environment.
Tom Clegg [Fri, 25 Jul 2014 01:26:37 +0000 (21:26 -0400)]
3349: Add default blob_signing_key for test environment.

9 years ago3349: Remove duplicate keys in default yml.
Tom Clegg [Fri, 25 Jul 2014 01:23:16 +0000 (21:23 -0400)]
3349: Remove duplicate keys in default yml.

9 years ago3349: Merge branch 'master' into 3349-install-docs
Tom Clegg [Fri, 25 Jul 2014 01:10:57 +0000 (21:10 -0400)]
3349: Merge branch 'master' into 3349-install-docs

9 years ago3349: Update to ruby 2.1.2
Tom Clegg [Fri, 25 Jul 2014 00:40:33 +0000 (20:40 -0400)]
3349: Update to ruby 2.1.2

9 years ago3349: Consolidate comments in application.default.yml
Tom Clegg [Fri, 25 Jul 2014 00:40:16 +0000 (20:40 -0400)]
3349: Consolidate comments in application.default.yml

9 years ago3235: Split GroupsController#contents logic out to load_searchable_objects.
Tom Clegg [Thu, 24 Jul 2014 23:03:35 +0000 (19:03 -0400)]
3235: Split GroupsController#contents logic out to load_searchable_objects.

9 years ago3321: Workbench copes when pipeline components have an odd form.
Brett Smith [Thu, 24 Jul 2014 20:18:35 +0000 (16:18 -0400)]
3321: Workbench copes when pipeline components have an odd form.

Closes #3321.

9 years ago2985: use move_selections_into_project action
Tim Pierce [Thu, 24 Jul 2014 19:01:48 +0000 (15:01 -0400)]
2985: use move_selections_into_project action

9 years agoAdd Keep install instructions (manual).
Ward Vandewege [Thu, 24 Jul 2014 16:58:43 +0000 (12:58 -0400)]
Add Keep install instructions (manual).

no issue #

9 years agoMerge branch '3200-ajax-error-handling'
Brett Smith [Thu, 24 Jul 2014 15:03:04 +0000 (11:03 -0400)]
Merge branch '3200-ajax-error-handling'

Closes #3200, #3207, #3251, #3276, #3322.

9 years ago3200: Improve error handling in Workbench's API client.
Brett Smith [Wed, 23 Jul 2014 20:50:18 +0000 (16:50 -0400)]
3200: Improve error handling in Workbench's API client.

* Fix the class used for error responses that can be parsed but don't
  have a dedicated subclass.

* Ensure that exception.api_response[:errors] is always an array.

This improves the error reporting for #3207.

9 years ago3200: X-Editable renders errors even without a message array.
Brett Smith [Wed, 23 Jul 2014 20:29:12 +0000 (16:29 -0400)]
3200: X-Editable renders errors even without a message array.

The previous version was causing the X-Editable popup to spin
infinitely when the JSON errors were null.  See #3207, #3251.

9 years ago3200: Workbench copes better when a tab fails to load.
Brett Smith [Tue, 22 Jul 2014 22:04:58 +0000 (18:04 -0400)]
3200: Workbench copes better when a tab fails to load.

9 years agoMerge branch 'master' into 3219-further-docker-improvements
Ward Vandewege [Thu, 24 Jul 2014 14:00:35 +0000 (10:00 -0400)]
Merge branch 'master' into 3219-further-docker-improvements