Lucas Di Pentima [Thu, 13 Dec 2018 16:11:04 +0000 (13:11 -0300)]
13006: Test exposing the bug
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 10 Dec 2018 21:18:35 +0000 (16:18 -0500)]
Merge branch '11419-text-mode'
closes #11419
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 10 Dec 2018 19:06:34 +0000 (14:06 -0500)]
Merge branch '14594-update-cwltool' refs #14594
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 10 Dec 2018 16:41:12 +0000 (11:41 -0500)]
Merge branch '14538-async-write'
fixes #14538
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 10 Dec 2018 16:40:13 +0000 (11:40 -0500)]
14594: Update to latest cwltool
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 10 Dec 2018 16:38:35 +0000 (11:38 -0500)]
14538: Merge branch 'master' into 14538-async-write
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 10 Dec 2018 16:37:40 +0000 (11:37 -0500)]
11419: Merge branch 'master' into 11419-text-mode
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 10 Dec 2018 16:25:38 +0000 (11:25 -0500)]
Merge branch '14476-cwl-missing-input' refs #14476
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 10 Dec 2018 16:20:41 +0000 (11:20 -0500)]
14476: Remove redundant falsey check
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 21:26:50 +0000 (16:26 -0500)]
14476: Add test that submitting with missing parameters correctly gets error.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 19:55:55 +0000 (14:55 -0500)]
14476: Fix RunnerTemplate
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 19:15:28 +0000 (14:15 -0500)]
14476: When creating a Runner, check input is valid before submitting
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:58:34 +0000 (15:58 -0500)]
Merge branch '14593-acr-crunch1' refs #14593
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:57:45 +0000 (15:57 -0500)]
14593: Fix typo.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:43:16 +0000 (15:43 -0500)]
14593: Add note about broken crunch1 to upgrade docs.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 7 Dec 2018 20:03:04 +0000 (15:03 -0500)]
14593: Fix a-c-r when running on the "jobs" API
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Mon, 3 Dec 2018 21:46:11 +0000 (16:46 -0500)]
Add a few upgrade notes for the 1.3.0 release.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Thu, 6 Dec 2018 21:30:38 +0000 (16:30 -0500)]
Merge branch '14574-expression-fix' refs #14574
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 19:59:27 +0000 (14:59 -0500)]
Merge branch '14584-runtime-user-reuse' refs #14584
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 19:18:54 +0000 (14:18 -0500)]
14584: Remove runtime_user_uuid and runtime_auth_scopes checks for reuse.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 18:16:33 +0000 (13:16 -0500)]
Merge branch '14583-no-dcpdh' refs #14583
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 5 Dec 2018 16:42:43 +0000 (11:42 -0500)]
14583: Delete arv:dockerCollectionPDH from DockerRequirement in RunInSingleContainer
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Tue, 4 Dec 2018 20:51:13 +0000 (17:51 -0300)]
Merge branch '14551-wb-login-as-token'
Closes #14551
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:32:59 +0000 (11:32 -0500)]
Merge branch '14574-thread-count-1' refs #14574
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:32:49 +0000 (11:32 -0500)]
Merge branch '14576-query-perf' refs #14576
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 16:17:12 +0000 (11:17 -0500)]
14576: Use the 'in' test for user queries
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 15:43:01 +0000 (10:43 -0500)]
14576: Adjust query for admins that filters out trashed items
refs #14576
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 4 Dec 2018 15:43:01 +0000 (10:43 -0500)]
14576: Adjust query for admins that filters out trashed items
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Tue, 4 Dec 2018 13:58:36 +0000 (08:58 -0500)]
Fix docker push command in run-build-docker-jobs-image.sh
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 3 Dec 2018 22:34:34 +0000 (17:34 -0500)]
14574: Ensure output callbacks take workflow lock
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Mon, 3 Dec 2018 21:29:24 +0000 (16:29 -0500)]
If a version tag is passed to run-build-docker-jobs-image.sh, actually use that
version of our codebase for the packages installed in the image.
run-build-docker-jobs-image.sh now also supports our ARVADOS_BUILDING_VERSION
and ARVADOS_BUILDING_ITERATION mechanism, so versions can be overridden that
way.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Mon, 3 Dec 2018 21:23:28 +0000 (16:23 -0500)]
14574: Default --thread-count=1 until threading is more fully baked.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 3 Dec 2018 17:00:39 +0000 (12:00 -0500)]
14560: Limit to_tsvector input to 8K.
refs #14560
refs #13752
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Sun, 2 Dec 2018 02:09:40 +0000 (21:09 -0500)]
Merge branch '14560-tsvector-too-long' refs #14560
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Sat, 1 Dec 2018 21:11:28 +0000 (16:11 -0500)]
14560: Only index the first 1M bytes of ft-searchable data.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 21:04:06 +0000 (16:04 -0500)]
Merge branch '14558-cwl-pkg-deps' refs #14558
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 20:32:27 +0000 (15:32 -0500)]
14558: Version dependency fixes.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Fri, 30 Nov 2018 20:32:25 +0000 (15:32 -0500)]
11419: Support text modes in Collection.open().
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 16:58:20 +0000 (11:58 -0500)]
Merge branch '14510-cwl-perf' refs #14510
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 15:50:20 +0000 (10:50 -0500)]
14510: Bugfix order of precedence for setting collection cache size
Fix a couple other buggy tests.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 30 Nov 2018 14:25:47 +0000 (09:25 -0500)]
14510: Don't initialize workflow redundantly.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Fri, 30 Nov 2018 02:08:05 +0000 (21:08 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo, not
the latest tag on the master branch (part 3). Make sure the change also works
in Python 3.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 20:41:50 +0000 (15:41 -0500)]
14538: Fix racy tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 20:15:42 +0000 (15:15 -0500)]
14538: Split inline func from sync() into commitBlock().
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 20:12:25 +0000 (15:12 -0500)]
14538: Reduce max writeahead to 1.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 19:49:31 +0000 (14:49 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo,
not the latest tag on the master branch (part 2).
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 19:34:25 +0000 (14:34 -0500)]
14538: Remove redundant condition.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 19:33:22 +0000 (14:33 -0500)]
14538: Fix test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Thu, 29 Nov 2018 14:06:54 +0000 (11:06 -0300)]
14551: Uses v2 token to log in as a user.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Thu, 29 Nov 2018 16:27:16 +0000 (13:27 -0300)]
14551: Test exposing the bug.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Thu, 29 Nov 2018 14:33:53 +0000 (09:33 -0500)]
14538: Merge branch 'master' into 14538-async-write
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 14:27:59 +0000 (09:27 -0500)]
Make sure the dev version prefix is based on the latest tag in the repo,
not the latest tag on the master branch.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Thu, 29 Nov 2018 03:23:34 +0000 (22:23 -0500)]
Work around ruamel.yaml packaging issue.
closes #14552
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Wed, 28 Nov 2018 21:54:27 +0000 (16:54 -0500)]
14538: Check write concurrency limit.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 28 Nov 2018 21:41:42 +0000 (16:41 -0500)]
14538: Use concurrent writers to flush chunks while writing.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 27 Nov 2018 21:44:45 +0000 (16:44 -0500)]
14538: Move cancel-on-first-error logic to contextGroup.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 26 Nov 2018 21:31:26 +0000 (16:31 -0500)]
14538: Use concurrent writers to sync multiple streams.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 26 Nov 2018 20:32:51 +0000 (15:32 -0500)]
14538: Use concurrent writers to sync a directory.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 20:12:19 +0000 (15:12 -0500)]
Stop relying on the keyservers during arvbox docker image build, they are too
unreliable.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Wed, 28 Nov 2018 19:42:06 +0000 (14:42 -0500)]
14510: Set collection metadata cache size as 150% of sum of inputs
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 19:19:23 +0000 (14:19 -0500)]
Release 1.2.1 does not require special attention when upgrading.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:32:11 +0000 (13:32 -0500)]
Merge branch '14345-add-webdav-user-doc'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:29:43 +0000 (13:29 -0500)]
Merge branch 'master' into 14345-add-webdav-user-doc
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:29:14 +0000 (13:29 -0500)]
14345: Some more language tweaks.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Morris [Wed, 28 Nov 2018 18:19:00 +0000 (13:19 -0500)]
Add OS X description & tweak Windows
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 18:12:34 +0000 (13:12 -0500)]
14535: fix typos.
refs #14535
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Wed, 28 Nov 2018 16:40:53 +0000 (11:40 -0500)]
Add user documentation for accessing Keep from Windows.
refs #14345
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 23:13:30 +0000 (18:13 -0500)]
14510: Estimate collection cache size wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 22:26:07 +0000 (17:26 -0500)]
14510: Update tests/docs for --collection-cache-size
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 20:53:07 +0000 (15:53 -0500)]
14510: Setting collection cache wip
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 19:33:53 +0000 (14:33 -0500)]
14510: Perfomance fixes
* Add --collection-cache to enable users to workaround cache thrashing
* Limit task queue size. Release workflow lock when attempting to
enqueue a task (which now may block).
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 20:54:37 +0000 (15:54 -0500)]
Restore default value of --on-error to 'continue' refs #14440
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 19:18:31 +0000 (14:18 -0500)]
Merge branch '14440-fed-user-doc' refs #14440
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 19:14:54 +0000 (14:14 -0500)]
14440: Fix formatting of cwl-run-options table.
Also expand help text of --on-error option a bit.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 18:15:18 +0000 (13:15 -0500)]
Merge branch '14535-ruamel-dependencies'
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 18:06:36 +0000 (13:06 -0500)]
14535: bumping package revision up for python-ruamel.yaml
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Peter Amstutz [Tue, 27 Nov 2018 17:47:11 +0000 (12:47 -0500)]
14440: Refresh cwl-run-options, add note about dockerCollectionPDH
Also add note about workbench not displaying remote steps.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Nico Cesar [Tue, 27 Nov 2018 16:27:44 +0000 (11:27 -0500)]
14535: add dependencies for ruamel.yaml
refs #14535
Arvados-DCO-1.1-Signed-off-by: Nico Cesar <ncesar@veritasgenetics.com>
Lucas Di Pentima [Mon, 26 Nov 2018 19:43:29 +0000 (16:43 -0300)]
Merge branch '14519-wb-textile-issues'
Closes #14519
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Mon, 26 Nov 2018 19:42:11 +0000 (16:42 -0300)]
14519: Adds more table related tags to the whitelist
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 21 Nov 2018 22:32:23 +0000 (19:32 -0300)]
14519: Fixes bug by adding table tags to the sanitizer white list
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Wed, 21 Nov 2018 22:31:51 +0000 (19:31 -0300)]
14519: Test exposing the regression
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 17:37:07 +0000 (12:37 -0500)]
14440: Add discussion of federation features.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:24:31 +0000 (16:24 -0500)]
14440: Federated workflow diagram.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:23:59 +0000 (16:23 -0500)]
14440: Comments on how federated.cwl works
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:46:06 +0000 (14:46 -0500)]
14440: Add project
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 18:42:38 +0000 (13:42 -0500)]
14440: Add project_uuid to ClusterTarget example
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 16:33:40 +0000 (11:33 -0500)]
14440: Federated workflow docs WIP
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 20 Nov 2018 22:20:52 +0000 (17:20 -0500)]
14440: Working on docs for federated workflows.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 15:42:02 +0000 (10:42 -0500)]
Merge branch '14198-make-builder' refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 26 Nov 2018 15:13:39 +0000 (10:13 -0500)]
14198: Restore behavior of creating an empty Builder object
Used for do_eval() on set_cluster_target(). Calling _init_job() turns
out to have some unintended side effects as well as doing redundant
work.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 21:39:59 +0000 (16:39 -0500)]
Finish fixing setting project_uuid from runtimeContext, fix tests.
refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:46:38 +0000 (14:46 -0500)]
Fix ClusterTarget.project_uuid to correctly set the project uuid
refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:44:23 +0000 (14:44 -0500)]
Merge branch '14345-nginx-proxy-request-buffering'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:34:17 +0000 (14:34 -0500)]
14345: Disable proxy request buffering in Nginx keepproxy example.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 19:14:04 +0000 (14:14 -0500)]
14345: Disable Nginx proxy request buffering for keep-web requests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 19:00:04 +0000 (14:00 -0500)]
Fix --submit-runner-cluster tests refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Wed, 21 Nov 2018 18:28:00 +0000 (13:28 -0500)]
Merge branch '14345-proppatch'
refs #14345
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 18:06:00 +0000 (13:06 -0500)]
Merge branch '14198-fed-testing' refs #14198
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 21 Nov 2018 17:41:11 +0000 (12:41 -0500)]
14198: Call validate_cluster_target on --submit-runner-cluster
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
projects / arvados.git / log