arvados.git
2 years ago18696: Integrate RNASeq-cwl-training into user guide
Peter Amstutz [Tue, 26 Apr 2022 18:41:42 +0000 (14:41 -0400)]
18696: Integrate RNASeq-cwl-training into user guide

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18835-uploadfiles-test' refs #18835
Peter Amstutz [Tue, 26 Apr 2022 13:28:43 +0000 (09:28 -0400)]
Merge branch '18835-uploadfiles-test' refs #18835

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoSalt installer multinode AWS example: modernize Arvados config a bit,
Ward Vandewege [Tue, 26 Apr 2022 12:52:53 +0000 (08:52 -0400)]
Salt installer multinode AWS example: modernize Arvados config a bit,
switch to using one S3 bucket for simplicity, make sure that the default
setting for CloudVMs/DriverParameters/IAMInstanceProfile matches
Volumes/DriverParameters/IAMRole.

refs #19054

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18835: Add a test for the is_in_collection feature of PathMapper
Peter Amstutz [Mon, 25 Apr 2022 21:00:53 +0000 (17:00 -0400)]
18835: Add a test for the is_in_collection feature of PathMapper

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '19054-local-keepstore-aws-doc-update'
Ward Vandewege [Mon, 25 Apr 2022 20:52:18 +0000 (16:52 -0400)]
Merge branch '19054-local-keepstore-aws-doc-update'

closes #19054

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago19054: Merge branch 'main' into 19054-local-keepstore-aws-doc-update
Ward Vandewege [Mon, 25 Apr 2022 20:51:22 +0000 (16:51 -0400)]
19054: Merge branch 'main' into 19054-local-keepstore-aws-doc-update

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago19054: more doc changes.
Ward Vandewege [Mon, 25 Apr 2022 20:32:52 +0000 (16:32 -0400)]
19054: more doc changes.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago19054: doc update
Ward Vandewege [Mon, 25 Apr 2022 20:13:38 +0000 (16:13 -0400)]
19054: doc update

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '17301-cwl-oom' refs #17301
Peter Amstutz [Mon, 25 Apr 2022 20:06:06 +0000 (16:06 -0400)]
Merge branch '17301-cwl-oom' refs #17301

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Add more logging handler teardown
Peter Amstutz [Mon, 25 Apr 2022 17:11:23 +0000 (13:11 -0400)]
17301: Add more logging handler teardown

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Clean up logging handler
Peter Amstutz [Mon, 25 Apr 2022 16:03:51 +0000 (12:03 -0400)]
17301: Clean up logging handler

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18888-cwl-dir-arg' refs #18888
Peter Amstutz [Mon, 25 Apr 2022 13:52:48 +0000 (09:52 -0400)]
Merge branch '18888-cwl-dir-arg' refs #18888

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Test handles line breaks
Peter Amstutz [Mon, 25 Apr 2022 13:51:23 +0000 (09:51 -0400)]
17301: Test handles line breaks

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Shorted OOM message. Limit added detail to 40 lines.
Peter Amstutz [Thu, 21 Apr 2022 18:16:49 +0000 (14:16 -0400)]
17301: Shorted OOM message.  Limit added detail to 40 lines.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18888: Fix tests
Peter Amstutz [Thu, 21 Apr 2022 16:12:53 +0000 (12:12 -0400)]
18888: Fix tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18894-manifest-size-doc' refs #18894
Peter Amstutz [Wed, 20 Apr 2022 14:43:27 +0000 (10:43 -0400)]
Merge branch '18894-manifest-size-doc' refs #18894

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18894: Mention API.MaxRequestSize
Peter Amstutz [Wed, 20 Apr 2022 14:42:54 +0000 (10:42 -0400)]
18894: Mention API.MaxRequestSize

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Fold subsequent messages into details
Peter Amstutz [Wed, 20 Apr 2022 13:46:50 +0000 (09:46 -0400)]
17301: Fold subsequent messages into details

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Log all messages in details
Peter Amstutz [Tue, 19 Apr 2022 19:41:24 +0000 (15:41 -0400)]
17301: Log all messages in details

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago17301: Report warning about OOM killer when exit code 137
Peter Amstutz [Tue, 19 Apr 2022 19:40:56 +0000 (15:40 -0400)]
17301: Report warning about OOM killer when exit code 137

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18888: Ensure that default File/Directory references are normalized
Peter Amstutz [Tue, 19 Apr 2022 17:19:05 +0000 (13:19 -0400)]
18888: Ensure that default File/Directory references are normalized

Add test.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18994-cwl-basename' refs #18994
Peter Amstutz [Tue, 19 Apr 2022 14:13:32 +0000 (10:13 -0400)]
Merge branch '18994-cwl-basename' refs #18994

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18994: Remove commented out code
Peter Amstutz [Tue, 19 Apr 2022 14:12:36 +0000 (10:12 -0400)]
18994: Remove commented out code

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18995-code-cleanup-2'
Ward Vandewege [Fri, 15 Apr 2022 22:10:36 +0000 (18:10 -0400)]
Merge branch '18995-code-cleanup-2'

refs #18995

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: Merge branch 'main' into 18995-code-cleanup-2
Ward Vandewege [Fri, 15 Apr 2022 22:09:44 +0000 (18:09 -0400)]
18995: Merge branch 'main' into 18995-code-cleanup-2

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18894: Add section "estimating manifest size"
Peter Amstutz [Fri, 15 Apr 2022 20:54:41 +0000 (16:54 -0400)]
18894: Add section "estimating manifest size"

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18995-code-cleanup-4'
Ward Vandewege [Fri, 15 Apr 2022 20:22:24 +0000 (16:22 -0400)]
Merge branch '18995-code-cleanup-4'

refs #18995

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: Merge branch 'main' into 18995-code-cleanup-4
Ward Vandewege [Fri, 15 Apr 2022 20:20:16 +0000 (16:20 -0400)]
18995: Merge branch 'main' into 18995-code-cleanup-4

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18992-hpc-local-keepstore'
Tom Clegg [Fri, 15 Apr 2022 19:28:21 +0000 (15:28 -0400)]
Merge branch '18992-hpc-local-keepstore'

closes #18992

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18995: add a generic font family for font awesome.
Ward Vandewege [Fri, 15 Apr 2022 18:51:14 +0000 (14:51 -0400)]
18995: add a generic font family for font awesome.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18994: Fix needs_new_collection errors found by tests
Peter Amstutz [Fri, 15 Apr 2022 18:49:12 +0000 (14:49 -0400)]
18994: Fix needs_new_collection errors found by tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18995: <html> element should have a language attribute.
Ward Vandewege [Fri, 15 Apr 2022 18:28:46 +0000 (14:28 -0400)]
18995: <html> element should have a language attribute.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18995-code-cleanup-3'
Ward Vandewege [Fri, 15 Apr 2022 18:23:34 +0000 (14:23 -0400)]
Merge branch '18995-code-cleanup-3'

refs #18995

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18994: Fix for colon characters in filenames
Peter Amstutz [Fri, 15 Apr 2022 17:44:57 +0000 (13:44 -0400)]
18994: Fix for colon characters in filenames

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18995: add scope to all <th> tags that are missing one.
Ward Vandewege [Fri, 15 Apr 2022 17:28:09 +0000 (13:28 -0400)]
18995: add scope to all <th> tags that are missing one.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: add missing <!DOCTYPE>
Ward Vandewege [Fri, 15 Apr 2022 17:04:54 +0000 (13:04 -0400)]
18995: add missing <!DOCTYPE>

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: webshell: add missing <head> tag, add missing <title>
Ward Vandewege [Fri, 15 Apr 2022 17:02:26 +0000 (13:02 -0400)]
18995: webshell: add missing <head> tag, add missing <title>

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: <html> element should have a language attribute.
Ward Vandewege [Fri, 15 Apr 2022 16:58:58 +0000 (12:58 -0400)]
18995: <html> element should have a language attribute.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: remove unused variable (dead code).
Ward Vandewege [Fri, 15 Apr 2022 16:49:31 +0000 (12:49 -0400)]
18995: remove unused variable (dead code).

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: use forEach instead of map, not using return value.
Ward Vandewege [Fri, 15 Apr 2022 16:23:06 +0000 (12:23 -0400)]
18995: use forEach instead of map, not using return value.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18994: Fix suffix
Peter Amstutz [Fri, 15 Apr 2022 16:00:16 +0000 (12:00 -0400)]
18994: Fix suffix

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18995: CSS comments can not use double slash
Ward Vandewege [Fri, 15 Apr 2022 15:51:44 +0000 (11:51 -0400)]
18995: CSS comments can not use double slash

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18994: Remove debug prints
Peter Amstutz [Fri, 15 Apr 2022 15:51:08 +0000 (11:51 -0400)]
18994: Remove debug prints

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18994: Fixing quoting WIP
Peter Amstutz [Fri, 15 Apr 2022 15:48:59 +0000 (11:48 -0400)]
18994: Fixing quoting WIP

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '18995-code-cleanup-1'
Ward Vandewege [Fri, 15 Apr 2022 15:45:59 +0000 (11:45 -0400)]
Merge branch '18995-code-cleanup-1'

refs #18995

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch 'main' into 18995-code-cleanup-1
Ward Vandewege [Fri, 15 Apr 2022 15:44:51 +0000 (11:44 -0400)]
Merge branch 'main' into 18995-code-cleanup-1

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: fix test oddity.
Ward Vandewege [Fri, 15 Apr 2022 15:40:23 +0000 (11:40 -0400)]
18995: fix test oddity.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: Merge branch 'main' into 18995-code-cleanup-1
Ward Vandewege [Fri, 15 Apr 2022 15:01:48 +0000 (11:01 -0400)]
18995: Merge branch 'main' into 18995-code-cleanup-1

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: proper fix for group class destroy method. Add a test.
Ward Vandewege [Fri, 15 Apr 2022 14:55:58 +0000 (10:55 -0400)]
18995: proper fix for group class destroy method. Add a test.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18995-addrislocal'
Tom Clegg [Thu, 14 Apr 2022 19:41:16 +0000 (15:41 -0400)]
Merge branch '18995-addrislocal'

refs #18995

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '18699-boot-multi-cluster'
Tom Clegg [Thu, 14 Apr 2022 19:38:54 +0000 (15:38 -0400)]
Merge branch '18699-boot-multi-cluster'

closes #18699

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18992: Fixup and test log messages about config loading.
Tom Clegg [Thu, 14 Apr 2022 19:08:56 +0000 (15:08 -0400)]
18992: Fixup and test log messages about config loading.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agodoc: update google analytics tag, remove old shim for IE6-9.
Ward Vandewege [Thu, 14 Apr 2022 19:01:17 +0000 (15:01 -0400)]
doc: update google analytics tag, remove old shim for IE6-9.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18992: Document how to use local keepstores with HPC dispatch.
Tom Clegg [Thu, 14 Apr 2022 18:41:57 +0000 (14:41 -0400)]
18992: Document how to use local keepstores with HPC dispatch.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18994: Remove debug print
Peter Amstutz [Thu, 14 Apr 2022 18:29:24 +0000 (14:29 -0400)]
18994: Remove debug print

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years ago18994: Add test case, correctly re-stage files when basename is changed.
Peter Amstutz [Wed, 13 Apr 2022 20:16:15 +0000 (16:16 -0400)]
18994: Add test case, correctly re-stage files when basename is changed.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

2 years agoMerge branch '19011-nokogiri-bump'
Ward Vandewege [Thu, 14 Apr 2022 15:20:22 +0000 (11:20 -0400)]
Merge branch '19011-nokogiri-bump'

closes #19011

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: Un-stub addrIsLocal, make it work for in-use ports.
Tom Clegg [Thu, 14 Apr 2022 14:59:14 +0000 (10:59 -0400)]
18995: Un-stub addrIsLocal, make it work for in-use ports.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago19011: Bump nokogiri to 1.13.4
Ward Vandewege [Thu, 14 Apr 2022 14:43:22 +0000 (10:43 -0400)]
19011: Bump nokogiri to 1.13.4

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18992: Load cluster config file if present in HPC environment.
Tom Clegg [Thu, 14 Apr 2022 14:18:15 +0000 (10:18 -0400)]
18992: Load cluster config file if present in HPC environment.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18995: Merge branch 'main' into 18995-code-cleanup-1
Ward Vandewege [Thu, 14 Apr 2022 13:50:03 +0000 (09:50 -0400)]
18995: Merge branch 'main' into 18995-code-cleanup-1

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18992: Fix abrupt exit on cgroup test failure.
Tom Clegg [Thu, 14 Apr 2022 06:32:09 +0000 (02:32 -0400)]
18992: Fix abrupt exit on cgroup test failure.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18992: Fix broken-node-hook global flag.
Tom Clegg [Thu, 14 Apr 2022 06:31:35 +0000 (02:31 -0400)]
18992: Fix broken-node-hook global flag.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18995: sdk/cwl: change function argument name to avoid confusion.
Ward Vandewege [Thu, 14 Apr 2022 00:26:46 +0000 (20:26 -0400)]
18995: sdk/cwl: change function argument name to avoid confusion.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: fuse: do not overwrite function argument in test.
Ward Vandewege [Wed, 13 Apr 2022 19:26:24 +0000 (15:26 -0400)]
18995: fuse: do not overwrite function argument in test.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: match up formatting strings and the number of arguments.
Ward Vandewege [Wed, 13 Apr 2022 19:22:24 +0000 (15:22 -0400)]
18995: match up formatting strings and the number of arguments.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: remove useless if statement.
Ward Vandewege [Wed, 13 Apr 2022 19:11:41 +0000 (15:11 -0400)]
18995: remove useless if statement.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: remove useless if statement.
Ward Vandewege [Wed, 13 Apr 2022 19:09:36 +0000 (15:09 -0400)]
18995: remove useless if statement.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: remove dead code.
Ward Vandewege [Wed, 13 Apr 2022 19:05:38 +0000 (15:05 -0400)]
18995: remove dead code.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoThe compute image building script autodetects the correct Go version to
Ward Vandewege [Wed, 13 Apr 2022 19:04:01 +0000 (15:04 -0400)]
The compute image building script autodetects the correct Go version to
install.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18947-dispatch-local'
Tom Clegg [Wed, 13 Apr 2022 19:02:50 +0000 (15:02 -0400)]
Merge branch '18947-dispatch-local'

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoThe package building scripts autodetect the correct Go version to
Ward Vandewege [Wed, 13 Apr 2022 18:41:55 +0000 (14:41 -0400)]
The package building scripts autodetect the correct Go version to
install.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18947: Remove separate keepproxy binary from lib/install steps.
Tom Clegg [Wed, 13 Apr 2022 18:34:10 +0000 (14:34 -0400)]
18947: Remove separate keepproxy binary from lib/install steps.

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18947: Fix panic in tests when TestIntegration doesn't run first.
Tom Clegg [Wed, 13 Apr 2022 18:27:52 +0000 (14:27 -0400)]
18947: Fix panic in tests when TestIntegration doesn't run first.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18947: Improve logging in test cases.
Tom Clegg [Wed, 13 Apr 2022 18:15:45 +0000 (14:15 -0400)]
18947: Improve logging in test cases.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18947: Close trackers before existing dispatch goroutine.
Tom Clegg [Wed, 13 Apr 2022 18:13:26 +0000 (14:13 -0400)]
18947: Close trackers before existing dispatch goroutine.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18699: Print booted clusterID and controller host:port on stdout.
Tom Clegg [Mon, 4 Apr 2022 14:57:24 +0000 (10:57 -0400)]
18699: Print booted clusterID and controller host:port on stdout.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18699: Remove unneeded OIDC config.
Tom Clegg [Mon, 4 Apr 2022 14:34:46 +0000 (10:34 -0400)]
18699: Remove unneeded OIDC config.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18699: boot.Supervisor support for multi-cluster config file.
Tom Clegg [Mon, 4 Apr 2022 14:18:07 +0000 (10:18 -0400)]
18699: boot.Supervisor support for multi-cluster config file.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '18976-c-d-l-dep'
Ward Vandewege [Wed, 13 Apr 2022 15:12:48 +0000 (11:12 -0400)]
Merge branch '18976-c-d-l-dep'

closes #18976

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18976: Merge branch 'main' into 18976-c-d-l-dep
Ward Vandewege [Wed, 13 Apr 2022 15:11:59 +0000 (11:11 -0400)]
18976: Merge branch 'main' into 18976-c-d-l-dep

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoMerge branch '18700-boot-wb2'
Tom Clegg [Wed, 13 Apr 2022 15:07:21 +0000 (11:07 -0400)]
Merge branch '18700-boot-wb2'

closes #18700

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18947: Bring back keepproxy systemd unit file.
Tom Clegg [Wed, 13 Apr 2022 14:38:46 +0000 (10:38 -0400)]
18947: Bring back keepproxy systemd unit file.

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18995: remove dead code
Ward Vandewege [Wed, 13 Apr 2022 13:18:24 +0000 (09:18 -0400)]
18995: remove dead code

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18995: remove erroneous return statement.
Ward Vandewege [Wed, 13 Apr 2022 13:17:42 +0000 (09:17 -0400)]
18995: remove erroneous return statement.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoFix package building, work around git issue caused by CVE-2022-24765.
Ward Vandewege [Wed, 13 Apr 2022 11:50:06 +0000 (07:50 -0400)]
Fix package building, work around git issue caused by CVE-2022-24765.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoInstaller bugfix (part 2).
Ward Vandewege [Tue, 12 Apr 2022 20:10:10 +0000 (16:10 -0400)]
Installer bugfix (part 2).

refs #16375

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years agoInstaller bugfix.
Ward Vandewege [Tue, 12 Apr 2022 18:20:18 +0000 (14:20 -0400)]
Installer bugfix.

refs #16375

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

2 years ago18700: Default to domain:443 for workbench2 ExternalURL.
Tom Clegg [Tue, 12 Apr 2022 16:02:38 +0000 (12:02 -0400)]
18700: Default to domain:443 for workbench2 ExternalURL.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Merge branch 'main'
Tom Clegg [Tue, 12 Apr 2022 15:54:26 +0000 (11:54 -0400)]
18700: Merge branch 'main'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Fix debian:10 install.
Tom Clegg [Tue, 12 Apr 2022 15:28:11 +0000 (11:28 -0400)]
18700: Fix debian:10 install.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Renumber default/example ports to 9000-9020 and 4440-4460.
Tom Clegg [Tue, 12 Apr 2022 15:01:10 +0000 (11:01 -0400)]
18700: Renumber default/example ports to 9000-9020 and 4440-4460.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years agoMerge branch '16375-arvados-multinode-testing'
Javier Bértoli [Tue, 12 Apr 2022 14:05:11 +0000 (11:05 -0300)]
Merge branch '16375-arvados-multinode-testing'

closes #16375
Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago16375: address review comments
Javier Bértoli [Tue, 12 Apr 2022 14:04:17 +0000 (11:04 -0300)]
16375: address review comments

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>

2 years ago18700: Fix max keepproxy request body size.
Tom Clegg [Tue, 12 Apr 2022 07:42:03 +0000 (03:42 -0400)]
18700: Fix max keepproxy request body size.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Run npm:install to prep workbench1 for package.
Tom Clegg [Tue, 12 Apr 2022 07:02:41 +0000 (03:02 -0400)]
18700: Run npm:install to prep workbench1 for package.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Proxy workbench2 to arvados-server-boot's server.
Tom Clegg [Tue, 12 Apr 2022 04:17:22 +0000 (00:17 -0400)]
18700: Proxy workbench2 to arvados-server-boot's server.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Export TLS.Insecure config.
Tom Clegg [Tue, 12 Apr 2022 04:15:07 +0000 (00:15 -0400)]
18700: Export TLS.Insecure config.

so workbench2 can show an appropriate
ARVADOS_API_HOST_INSECURE=... line in the shell env script.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago18700: Mount the whole acme dir.
Tom Clegg [Tue, 12 Apr 2022 04:09:03 +0000 (00:09 -0400)]
18700: Mount the whole acme dir.

acmetool uses symlinks like /var/lib/acme/live/$dom/privkey ->
../../keys/$id/privkey

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

2 years ago16375: revert insecure flag in multi-host template file
Javier Bértoli [Mon, 11 Apr 2022 20:59:28 +0000 (17:59 -0300)]
16375: revert insecure flag in multi-host template file

Arvados-DCO-1.1-Signed-off-by: Javier Bértoli <jbertoli@curii.com>