Tom Clegg [Mon, 23 Aug 2021 14:01:40 +0000 (10:01 -0400)]
17698: Add comment to clarify locking.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 23 Aug 2021 14:01:32 +0000 (10:01 -0400)]
17698: Update PutBlock comment.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 23 Aug 2021 14:00:50 +0000 (10:00 -0400)]
17698: Rename newPutResult to match new putProgress type name.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 23 Aug 2021 14:00:01 +0000 (10:00 -0400)]
17698: Fix AllWritable panic when no volumes are writable.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 13 Aug 2021 15:06:34 +0000 (11:06 -0400)]
17698: Do concurrent writes when multiple volumes are needed.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 12 Aug 2021 20:05:59 +0000 (16:05 -0400)]
Merge branch '17726-singularity-doc' into main
closes #17726
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Thu, 12 Aug 2021 13:07:06 +0000 (09:07 -0400)]
Merge branch '17947-centos7-package-conflict'
closes #17947
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 12 Aug 2021 13:06:36 +0000 (09:06 -0400)]
17947: Merge branch 'main' into 17947-centos7-package-conflict
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Wed, 11 Aug 2021 19:40:59 +0000 (16:40 -0300)]
Merge branch '18005-collection-versioning-regression' into main. Closes #18004
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Wed, 11 Aug 2021 19:29:07 +0000 (15:29 -0400)]
17947: the Arvados python3-* CentOS packages should conflict with the
corresponding older rh-python36-* version.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Wed, 11 Aug 2021 18:37:46 +0000 (15:37 -0300)]
18005: Fixes the bug.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 11 Aug 2021 18:31:11 +0000 (15:31 -0300)]
18005: Exposes the bug by simulating a keep-balance run a making a new version.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Wed, 11 Aug 2021 15:20:24 +0000 (11:20 -0400)]
Merge branch '17985-cwltool-binstub'
closes #17985
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 11 Aug 2021 15:19:35 +0000 (11:19 -0400)]
17985: fix binstub for cwltool in our arvados-cwl-runner package.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 10 Aug 2021 21:00:45 +0000 (17:00 -0400)]
17726: Add Singularity info to user docs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 10 Aug 2021 18:57:21 +0000 (15:57 -0300)]
Merge branch '17936-arvput-batch-mode' into main. Closes #17936.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Tue, 10 Aug 2021 14:43:25 +0000 (10:43 -0400)]
Merge branch '17967-storage-classes-config' into main
closes #17967
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Mon, 9 Aug 2021 18:12:48 +0000 (15:12 -0300)]
17936: Updates arv-keepdocker to call arv-put with --batch argument.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Mon, 9 Aug 2021 17:58:41 +0000 (14:58 -0300)]
17936: Adds --batch implementation, making the new test pass.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 9 Aug 2021 17:23:44 +0000 (13:23 -0400)]
17967: Update generated config.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Mon, 9 Aug 2021 16:56:44 +0000 (13:56 -0300)]
17936: Adds --batch argument to arv-put, updates test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 9 Aug 2021 15:29:10 +0000 (11:29 -0400)]
17967: Test new behavior for default storage_classes_desired.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 9 Aug 2021 15:11:32 +0000 (11:11 -0400)]
17967: Link to config doc page from conf file and upgrade notes.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 9 Aug 2021 13:49:03 +0000 (09:49 -0400)]
17726: More detail about singularity/docker differences.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 9 Aug 2021 13:38:13 +0000 (09:38 -0400)]
17726: Link singularity install docs. Add dispatch-lsf mention.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Fri, 6 Aug 2021 14:19:59 +0000 (10:19 -0400)]
17967: Update storage classes docs.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 5 Aug 2021 21:57:50 +0000 (17:57 -0400)]
17967: Update tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 5 Aug 2021 19:14:57 +0000 (15:14 -0400)]
17726: Add singularity doc page.
Move Docker image collection format note from 2.2 to main (this change
was not in 2.2).
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Thu, 5 Aug 2021 16:13:42 +0000 (12:13 -0400)]
Merge branch '17952-no-nodes-link' into main closes #17952
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Thu, 5 Aug 2021 15:04:37 +0000 (11:04 -0400)]
17967: Use StorageClasses.*.Default instead of ["default"].
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Thu, 5 Aug 2021 14:25:00 +0000 (10:25 -0400)]
17952: Remove tests for presence of nodes / disks menu item
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Thu, 5 Aug 2021 03:21:45 +0000 (23:21 -0400)]
17967: Read from volumes with high-priority storage classes first.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Peter Amstutz [Wed, 4 Aug 2021 21:38:09 +0000 (17:38 -0400)]
17952: Remove links to obsolete "nodes" and "keep disks"
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Tom Clegg [Wed, 4 Aug 2021 20:57:35 +0000 (16:57 -0400)]
17967: Add StorageClasses config section.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 4 Aug 2021 15:25:12 +0000 (11:25 -0400)]
Merge branch '17574-storage-classes-confirmed' into main
closes #17574
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 4 Aug 2021 14:02:15 +0000 (10:02 -0400)]
17574: Merge branch 'main'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Tue, 3 Aug 2021 21:33:22 +0000 (17:33 -0400)]
Merge branch '17591-doc-improvement'
closes #17591
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 3 Aug 2021 21:32:59 +0000 (17:32 -0400)]
Merge branch 'main' into 17591-doc-improvement
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 3 Aug 2021 21:26:30 +0000 (17:26 -0400)]
17591: address review feedback.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 3 Aug 2021 21:02:37 +0000 (17:02 -0400)]
Update the package repositories page, we now have Debian 11 (bullseye)
pacakges.
refs #17949
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 3 Aug 2021 20:42:04 +0000 (16:42 -0400)]
17574: Confirm storage classes as [] when replication is 0.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 3 Aug 2021 15:46:20 +0000 (11:46 -0400)]
Fix map write when only RLock held.
Similar to
dd8ae798774d29b35532b99b78cae67a151654be.
No issue #
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Tue, 3 Aug 2021 15:15:20 +0000 (11:15 -0400)]
17591: be more explicit about the required TLS certificates and DNS
hostnames.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Fri, 30 Jul 2021 17:27:35 +0000 (13:27 -0400)]
Add extra validation of our package version format in the build scripts,
it must match
^[0-9]+\.[0-9]+\.[0-9]+(\.[0-9]+|)(~rc[0-9]+|~dev[0-9]+|)-[0-9]+$
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 29 Jul 2021 20:13:54 +0000 (16:13 -0400)]
More cleanup, remove references to Ubuntu 16.04 (xenial) which is no
longer supported.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 29 Jul 2021 20:12:44 +0000 (16:12 -0400)]
Debian 11 (bullseye) will be a supported distribution in the next major
Arvados release.
refs #17949
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 29 Jul 2021 19:52:44 +0000 (15:52 -0400)]
Merge branch '17949-add-bullseye'
closes #17949
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 29 Jul 2021 18:40:10 +0000 (14:40 -0400)]
17574: Fix map write when only RLock held.
Similar to
dd8ae798774d29b35532b99b78cae67a151654be.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Thu, 29 Jul 2021 18:01:35 +0000 (14:01 -0400)]
17949: add support for Debian Bullseye in our build scripts. Remove some
configuration for older, no longer supported distributions.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Thu, 29 Jul 2021 13:57:48 +0000 (09:57 -0400)]
Merge branch '17756-dispatch-lsf' into main
closes #17756
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 29 Jul 2021 03:45:23 +0000 (23:45 -0400)]
17574: Fix misleading errors after reaching update limit.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 22:23:05 +0000 (18:23 -0400)]
17574: Update test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 22:22:08 +0000 (18:22 -0400)]
17574: Fix wait on empty channel.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 20:20:33 +0000 (16:20 -0400)]
17574: Update install/upgrade docs wrt PostgreSQL access.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 20:11:52 +0000 (16:11 -0400)]
17574: Batch updates into transactions, skip when unchanged.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Wed, 28 Jul 2021 19:28:17 +0000 (15:28 -0400)]
Fix the example AWS InstanceTypes for the installer, none of these node
types come with IncludedScratch.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 28 Jul 2021 15:11:50 +0000 (11:11 -0400)]
Merge branch '17903-login-sync-centos7'
closes #17903
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 28 Jul 2021 15:11:11 +0000 (11:11 -0400)]
17903: Merge branch 'main' into 17903-login-sync-centos7
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Wed, 28 Jul 2021 13:43:07 +0000 (10:43 -0300)]
Merge branch '17830-reqid-header-propagation-fix' into main. Closes #17830
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Wed, 28 Jul 2021 04:19:03 +0000 (00:19 -0400)]
17574: Process collections in a worker pool.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 04:18:53 +0000 (00:18 -0400)]
17574: Add BalanceUpdateLimit config, fix tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 04:13:50 +0000 (00:13 -0400)]
17574: add -pprof flag to service commands.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Wed, 28 Jul 2021 04:04:56 +0000 (00:04 -0400)]
17574: Speed up manifest parsing.
Previous code spent a lot of time allocating, copying, and GCing
strings. Working with byte slices is much faser.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 27 Jul 2021 21:19:54 +0000 (18:19 -0300)]
17830: Moves header setting code to cover more use cases.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 27 Jul 2021 19:22:26 +0000 (16:22 -0300)]
17830: Adds test cases & fixes one more issue.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Ward Vandewege [Tue, 27 Jul 2021 18:40:19 +0000 (14:40 -0400)]
17903: use more distribution-agnostic commands to add/remove a user
to/from a group. This makes arvados-login-sync work on CentOS as
well as Debian-based distributions.
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Tom Clegg [Tue, 27 Jul 2021 15:23:48 +0000 (11:23 -0400)]
17574: Add -update-confirmed-fields=false option.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Tue, 27 Jul 2021 15:16:49 +0000 (11:16 -0400)]
17574: Get collections directly from DB instead of controller.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Lucas Di Pentima [Tue, 27 Jul 2021 14:35:21 +0000 (11:35 -0300)]
Merge branch '16665-keepproxy-spurious-413-status' into main. Closes #16665
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Mon, 26 Jul 2021 20:02:31 +0000 (16:02 -0400)]
Merge branch '17813-docker-to-singularity' into main
refs #17813
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 26 Jul 2021 20:01:54 +0000 (16:01 -0400)]
17813: Error out if sif cache collection cannot be created.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Mon, 26 Jul 2021 19:28:01 +0000 (15:28 -0400)]
17574: Update replication_confirmed fields after keep-balance run.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Mon, 26 Jul 2021 19:09:44 +0000 (15:09 -0400)]
Fix typo in documentation.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Lucas Di Pentima [Mon, 26 Jul 2021 14:32:05 +0000 (11:32 -0300)]
Merge branch '17388-arvcopy-storage-classes' into main. Closes #17388
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Fri, 23 Jul 2021 22:52:00 +0000 (19:52 -0300)]
17388: Adds storage classes support to arv-copy.
Also, updates tests and documentation.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Fri, 23 Jul 2021 18:35:15 +0000 (14:35 -0400)]
17813: Handle case where the cache collection update fails
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Thu, 22 Jul 2021 21:32:44 +0000 (17:32 -0400)]
17813: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Thu, 22 Jul 2021 21:02:53 +0000 (18:02 -0300)]
16665: Fixes tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Thu, 22 Jul 2021 20:44:19 +0000 (16:44 -0400)]
17813: continue refactor & fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Thu, 22 Jul 2021 20:30:51 +0000 (17:30 -0300)]
16665: Wraps error type to be able to differentiate it in a case switch.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Thu, 22 Jul 2021 20:24:26 +0000 (17:24 -0300)]
16665: Exposes bug through updated test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Peter Amstutz [Thu, 22 Jul 2021 20:22:39 +0000 (16:22 -0400)]
17813: Refactor singularity image loading / caching / conversion
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Lucas Di Pentima [Thu, 22 Jul 2021 18:31:11 +0000 (15:31 -0300)]
17830: Copies request's X-Request-Id header to response. Moves tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Wed, 21 Jul 2021 23:51:10 +0000 (20:51 -0300)]
17830: Sets up X-Request-Id if not provided by client. Adds it to the response.
Uses the IDGenerator to explicitly set one request id if needed, so that it
can return it to the client without the need to dig it out from the railsAPI
response.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 20 Jul 2021 20:59:58 +0000 (17:59 -0300)]
17830: Adds controller tests exposing the X-Request-Id header propagation bug.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 20 Jul 2021 19:23:36 +0000 (16:23 -0300)]
17830: Customizes ActionDispatch::RequestId middleware to our needs.
Moves all the request id code to the proper middleware, and updates tests.
As functional tests are "unit tests for controllers", things that happen inside
middlewares need to be tested from integration tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Lucas Di Pentima [Tue, 20 Jul 2021 14:26:21 +0000 (11:26 -0300)]
17830: Adds test exposing incorrect X-Request-Id format on railsAPI.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>
Tom Clegg [Thu, 22 Jul 2021 15:10:25 +0000 (11:10 -0400)]
17756: Fix test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 22 Jul 2021 15:06:29 +0000 (11:06 -0400)]
17756: Note that bsub sudo user must exist on worker nodes.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Tom Clegg [Thu, 22 Jul 2021 14:36:14 +0000 (10:36 -0400)]
17756: Move "no suitable instance type" reporting to dispatch lib.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>
Ward Vandewege [Thu, 22 Jul 2021 14:27:45 +0000 (10:27 -0400)]
Merge branch '17863-bundler-update'
closes #17863
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 22 Jul 2021 14:25:59 +0000 (10:25 -0400)]
17863: Merge branch 'main' into 17863-bundler-update
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Thu, 22 Jul 2021 13:02:27 +0000 (09:02 -0400)]
17863: further cleanup in our rails postinst scripts and documentation:
* replace `bundle exec` calls with the appropriate binstub
* update deprecated use of `bundle install --path` to avoid warning
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 21 Jul 2021 12:46:46 +0000 (08:46 -0400)]
Merge branch '17962-bump-lib-pq'
closes #17962
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Wed, 21 Jul 2021 12:46:12 +0000 (08:46 -0400)]
17962: Merge branch 'main' into 17962-bump-lib-pq
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Peter Amstutz [Tue, 20 Jul 2021 21:01:24 +0000 (17:01 -0400)]
17813: Change default value of runtime_auth_scopes to []
It is documented to be an array of strings, so having the default be
an object just seems to be a mistake.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 20 Jul 2021 21:01:08 +0000 (17:01 -0400)]
17813: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Peter Amstutz [Tue, 20 Jul 2021 20:28:30 +0000 (16:28 -0400)]
Make singularity suid in arvbox, crunch-dispatch-local runs as user
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Ward Vandewege [Tue, 20 Jul 2021 19:25:05 +0000 (15:25 -0400)]
17962: Bump the version of lib/pq to 1.10.2
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>
Ward Vandewege [Tue, 20 Jul 2021 17:08:46 +0000 (13:08 -0400)]
Another doc tweak.
refs #17464
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>