Tom Clegg [Thu, 21 Mar 2019 20:50:32 +0000 (16:50 -0400)]
Merge branch '14807-prod-blockers'
refs #14807
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Morris [Thu, 21 Mar 2019 20:02:20 +0000 (16:02 -0400)]
Merge branch '14451-crunchstat-summary-cache-ram'
Fix three small crunchstat-summary issues:
- Use default of 1 if no cores requested. fixes #12026
- Don't recommend RAM or CPU changes based on zero usage. fixes #10570
- Remove extra MB (2**20) factor in Keep cache recommendation. Fixes #14451
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 15 Mar 2019 05:11:59 +0000 (01:11 -0400)]
Improve wording with direction of recommendation change.
No issue.
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 15 Mar 2019 04:47:38 +0000 (00:47 -0400)]
Use default of 1 if no cores requested. refs #12026
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 15 Mar 2019 04:10:06 +0000 (00:10 -0400)]
Don't recommend RAM or CPU changes based on zero usage. refs #10570
Never recommend 0 MB RAM. If CPU usage is zero, don't make any
CPU recommendations.
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 15 Mar 2019 04:03:59 +0000 (00:03 -0400)]
Fix Keep cache recommendation calculation.
Remove extra MB (2**20) factor. Refs #14451
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 15 Mar 2019 02:11:45 +0000 (22:11 -0400)]
Spell MB consistently.
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Eric Biagiotti [Thu, 21 Mar 2019 19:52:26 +0000 (15:52 -0400)]
Merge branch '14645-fuse-operations-reporting'
refs #14645
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Tom Morris [Thu, 21 Mar 2019 19:47:54 +0000 (15:47 -0400)]
Merge branch '14939-crunchstat-summary-python3'
Fixes #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Thu, 14 Mar 2019 22:47:20 +0000 (18:47 -0400)]
Resolve deprecation warnings
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Thu, 14 Mar 2019 22:30:52 +0000 (18:30 -0400)]
Fix resource leak warned by Python 3
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Wed, 13 Mar 2019 23:33:03 +0000 (19:33 -0400)]
Add crunchstat-summary to Python 3 tests. refs #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Wed, 13 Mar 2019 23:26:00 +0000 (19:26 -0400)]
Fix test Python 3 integer divide difference.
Use float for both Python 2 & 3 like the rest of the metrics.
refs #14393
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Morris [Fri, 8 Mar 2019 23:40:24 +0000 (18:40 -0500)]
Update crunchstat-summary to Python 3. Refs #14939
Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>
Tom Clegg [Thu, 21 Mar 2019 18:12:54 +0000 (14:12 -0400)]
14807: Allow some fake nodes to remain unbroken.
If every fake node hits a fake failure mode in 200-400 ms, throughput
can fall below 20 containers per second and fail the test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Eric Biagiotti [Thu, 21 Mar 2019 18:03:16 +0000 (14:03 -0400)]
Merge remote-tracking branch 'origin/master' into 14645-fuse-operations-reporting
refs #14645
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Eric Biagiotti [Thu, 21 Mar 2019 14:49:31 +0000 (10:49 -0400)]
14645: Updates crunchstat format for fuse ops
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Lucas Di Pentima [Wed, 20 Mar 2019 20:17:07 +0000 (17:17 -0300)]
Merge branch '14873-google-api-client-update'
Refs #14873
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 05:50:10 +0000 (01:50 -0400)]
14807: Give up if initial keep services list isn't loaded in 60s.
Otherwise, MakeKeepClient blocks forever when ARVADOS_* env vars are
bad.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 21:02:05 +0000 (17:02 -0400)]
14807: Report queue metrics.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 17:40:10 +0000 (13:40 -0400)]
14807: Add "kill instance" management API.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 21:27:40 +0000 (17:27 -0400)]
14807: Configurable rate limit for cloud provider API calls.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 20:32:58 +0000 (16:32 -0400)]
14807: Drain instances that crunch-run reports broken.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 19:24:02 +0000 (15:24 -0400)]
Merge branch '14807-escalate-sigterm'
refs #14807
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 19:20:57 +0000 (15:20 -0400)]
14807: Merge branch 'master'
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 19:20:38 +0000 (15:20 -0400)]
14807: Tweak log message.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 18:07:06 +0000 (14:07 -0400)]
Merge branch '14947-run-tests-interactive'
closes #14947
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 17:41:35 +0000 (13:41 -0400)]
14947: Ignore --only / --skip args in interactive mode.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Wed, 20 Mar 2019 17:39:03 +0000 (14:39 -0300)]
14873: Updates arvados & arvados-cli gems dependency on google-api-client.
Start using our own fork arvados-google-api-client that ask for activesupport
version <5.1 so that it doesn't block the rails 5 upgrade.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 17:37:28 +0000 (13:37 -0400)]
14947: Fix controller install in deps.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Wed, 20 Mar 2019 13:28:24 +0000 (09:28 -0400)]
14947: Accept test suite options in interactive mode.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Eric Biagiotti [Tue, 19 Mar 2019 20:27:00 +0000 (16:27 -0400)]
14645: Adds op counts to reporting
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 20:23:55 +0000 (16:23 -0400)]
14947: Install controller (cmd/arvados-server) for integration tests.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 17:28:39 +0000 (13:28 -0400)]
14807: Don't send SIGKILL to crunch-run processes.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Eric Biagiotti [Tue, 19 Mar 2019 17:26:26 +0000 (13:26 -0400)]
14645: Adds individual ops time output
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 15:57:32 +0000 (11:57 -0400)]
14807: Add comments to "error indicates success" code.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Tue, 19 Mar 2019 14:30:36 +0000 (10:30 -0400)]
14947: Suggest "install deps" as first interactive command.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 18 Mar 2019 20:13:35 +0000 (16:13 -0400)]
Move back arvbox version of nodejs to fix composer compile issue
no issue #
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 19:16:25 +0000 (15:16 -0400)]
14807: Update tests to new worker/pool interface.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 19:08:19 +0000 (15:08 -0400)]
14807: Lengthen kill delays in stub driver to test term-kill-drain.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Mon, 18 Mar 2019 18:43:31 +0000 (14:43 -0400)]
Merge branch '14322-cwl-uuid-input' refs #14322
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 18 Mar 2019 18:04:19 +0000 (14:04 -0400)]
14322: Tweak JSON_KEEP_LOCATOR_REGEXP and comment
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 15:09:09 +0000 (11:09 -0400)]
14807: Escalate sigterm->sigkill->drain instance.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 15:44:19 +0000 (11:44 -0400)]
14807: Fail test if a container gets run twice.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 15:44:07 +0000 (11:44 -0400)]
14807: Fix unreliable test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 15:11:56 +0000 (11:11 -0400)]
Merge branch '14977-kill-if-not-in-queue'
fixes #14977
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 18 Mar 2019 13:42:27 +0000 (09:42 -0400)]
14977: Re-order statements for clarity.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Mar 2019 20:19:51 +0000 (16:19 -0400)]
14977: Don't try fixStaleLocks until worker pool state is loaded.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Mar 2019 20:11:48 +0000 (16:11 -0400)]
14977: Kill containers that don't exist according to controller.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Fri, 15 Mar 2019 19:21:39 +0000 (15:21 -0400)]
14977: Drop containers when the controller says they don't exist.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 15 Mar 2019 14:54:59 +0000 (10:54 -0400)]
14322: Fix noisy unicode logging error in tests, add comments
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 21:30:57 +0000 (17:30 -0400)]
14322: Add missing test files
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 21:26:07 +0000 (17:26 -0400)]
14322: Workbench links collection uuids in workflow inputs
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 21:20:22 +0000 (17:20 -0400)]
14322: Update comment on bwa-mem-input-mixed.yml
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 20:40:33 +0000 (16:40 -0400)]
14322: Add additional example input files
* with uuids
* with both portable data hashes and uuids
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 20:19:37 +0000 (16:19 -0400)]
14322: Tweak workbench support from manual testing
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 19:52:20 +0000 (15:52 -0400)]
14322: Update workbench to use new collectionUUID
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 19:25:33 +0000 (15:25 -0400)]
14322: Fix tests
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 18:57:53 +0000 (14:57 -0400)]
14322: Tweak documentation to mention uuid keep URI form
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Wed, 13 Mar 2019 18:57:20 +0000 (14:57 -0400)]
14322: CollectionFsAccess accepts UUIDs
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Tue, 12 Mar 2019 20:39:12 +0000 (16:39 -0400)]
14322: Tests for edge cases
Report unknown uuids and mismatches between current collection
PDH (from API server lookup) and location PDH.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 11 Mar 2019 21:42:09 +0000 (17:42 -0400)]
14322: Propagate collection UUID to container mount
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Mon, 11 Mar 2019 21:02:14 +0000 (17:02 -0400)]
14322: Convert uuids on input to portable data hashes
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 15 Mar 2019 14:10:15 +0000 (10:10 -0400)]
Fix a-c-r printing logs on error refs #14870
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 14 Mar 2019 20:24:18 +0000 (16:24 -0400)]
14947: run-tests: add --interactive, skip deps on --skip-install.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Lucas Di Pentima [Thu, 14 Mar 2019 19:42:18 +0000 (16:42 -0300)]
Merge branch '14966-api-test-hang-fix'
Closes #14966
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Thu, 7 Feb 2019 22:07:08 +0000 (17:07 -0500)]
Arvbox updates, no issue #
* Bump Go version, add openjdk.
* Bump node version. Make sure node is in path.
* Fix $HOME in setup scripts.
* Add "arvbox devenv" command which creates and enters a container
environment suitable for interactively running development tools
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Thu, 14 Mar 2019 18:56:00 +0000 (15:56 -0300)]
14966: Implements cleanup on test case teardown.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Eric Biagiotti [Thu, 14 Mar 2019 13:26:29 +0000 (09:26 -0400)]
14645: Adds prometheus_client dependency
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Lucas Di Pentima [Wed, 13 Mar 2019 23:52:25 +0000 (20:52 -0300)]
14966: Fixes test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Eric Biagiotti [Wed, 13 Mar 2019 17:49:48 +0000 (13:49 -0400)]
Merge remote-tracking branch 'origin/master' into 14645-fuse-operations-reporting
refs #14645
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Eric Biagiotti [Wed, 13 Mar 2019 17:46:26 +0000 (13:46 -0400)]
14645: Adds FUSE ops time to crunchstat output
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Makes stat writing more generic. Now can accommodate different stat counts and types.
Eric Biagiotti [Wed, 13 Mar 2019 17:43:03 +0000 (13:43 -0400)]
14645: Adds FUSE ops timing using prometheus
Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
Ward Vandewege [Wed, 13 Mar 2019 15:42:30 +0000 (11:42 -0400)]
Switch to stretch-slim as the base image for arvados/jobs, this results in a
smaller image.
arvados/jobs 1.3.1.
20190308210512 2a6c5e4993e7 4 days ago 284MB
arvados/jobs latest
0cfff29120dd 20 minutes ago 232MB
refs #14819
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Lucas Di Pentima [Wed, 13 Mar 2019 15:09:14 +0000 (12:09 -0300)]
Merge branch '13593-async-perm-graph-update'
Closes #13593
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 20:32:43 +0000 (17:32 -0300)]
Merge branch '13937-keepstore-prometheus'
Closes #13937
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 18:58:57 +0000 (15:58 -0300)]
13593: Moves & enhances group creation with async=true test.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 18:19:36 +0000 (15:19 -0300)]
13937: Removes the 'any' operation type for a better way of testing driver labels
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 15:04:49 +0000 (12:04 -0300)]
13593: Cleans up old experimental code.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 14:38:09 +0000 (11:38 -0300)]
13593: Changes default async permission update interval. Clears cache.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Ward Vandewege [Tue, 12 Mar 2019 14:32:05 +0000 (10:32 -0400)]
Some build script housekeeping: fix the detection logic for the existence of
Debian/Ubuntu packages on our apt repositories.
No issue #
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Ward Vandewege [Tue, 12 Mar 2019 14:31:13 +0000 (10:31 -0400)]
Build the cwltest package, which lives out of tree.
refs #9945
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 14:10:51 +0000 (11:10 -0300)]
13937: Removes unnecessary data passing on tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 12:51:11 +0000 (09:51 -0300)]
13593: Updates API documentation.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Lucas Di Pentima [Tue, 12 Mar 2019 12:33:30 +0000 (09:33 -0300)]
13593: Adds 'async' parameter to groups create & update calls for perms updates.
When async=true, the permission graph update will be deferred by the configured
amount of seconds at 'async_permissions_update_interval' (default: 60)
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Tom Clegg [Mon, 11 Mar 2019 20:21:26 +0000 (16:21 -0400)]
Fix error message.
No issue #.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Ward Vandewege [Mon, 11 Mar 2019 15:04:44 +0000 (11:04 -0400)]
Explicitly print the version numbers of virtualenv, pip, setuptools and wheel
when building Python packages.
refs #14936
Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>
Tom Clegg [Mon, 11 Mar 2019 04:34:33 +0000 (00:34 -0400)]
Merge branch '14938-unreliable-test'
fixes #14938
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Mon, 11 Mar 2019 04:32:22 +0000 (00:32 -0400)]
14938: Fix unreliable test.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Fri, 8 Mar 2019 21:05:12 +0000 (16:05 -0500)]
Merge branch '14880-keepdocker-argparse' refs #14880
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 8 Mar 2019 21:03:03 +0000 (16:03 -0500)]
14880: Fix help message typo.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Lucas Di Pentima [Fri, 8 Mar 2019 20:56:17 +0000 (17:56 -0300)]
13937: Adds tests for operation & I/O counters.
Added {"operation": "any"} to opsCounters so that it's easy to check on tests,
because the kind of operation depends on the driver and the tests were
implemented as part of the volume generic tests.
Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>
Peter Amstutz [Fri, 8 Mar 2019 20:19:59 +0000 (15:19 -0500)]
Merge branch '14291-cdc-aws' refs #14291
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 8 Mar 2019 20:18:44 +0000 (15:18 -0500)]
14291: EbsVolumeType → EBSVolumeType
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Fri, 8 Mar 2019 15:14:27 +0000 (10:14 -0500)]
14880: Fix argument parsing issues
arv-keepdocker passes through some flags to arv-put. The strategy it
uses is to remove known flags and pass through unknown flags. However
it doesn't know if an unknown flag takes a value or not, so it treats
the values as a positional argument rather than the value
corresponding to the unknown flag.
* Move positional arguments from "keepdocker_parser" to "arg_parser"
* Strip positional arguments (image name, tag) from arguments before
parsing known keepdocker_parser flags.
* Additionally move a couple of flags that were mistakenly added to
put.run_opts (and thus appearing in the arv-keepdocker help despite
making no sense) that should have been in put.upload_opts
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 7 Mar 2019 21:53:14 +0000 (16:53 -0500)]
14291: Exclude both "shutting-down" and "terminated" instances.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Peter Amstutz [Thu, 7 Mar 2019 21:27:18 +0000 (16:27 -0500)]
14291: Generate key fingerprints that work with AWS. Filter out terminated instances
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
Tom Clegg [Thu, 7 Mar 2019 19:35:01 +0000 (14:35 -0500)]
Merge branch '14920-unknown-booting-race'
fixes #14920
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Tom Clegg [Thu, 7 Mar 2019 19:27:13 +0000 (14:27 -0500)]
14920: Update metrics when worker state changes idle->running.
Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>
Peter Amstutz [Thu, 7 Mar 2019 19:16:40 +0000 (14:16 -0500)]
14291: Add EbsVolumeType, also test fixes
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>
projects / arvados.git / log