arvados.git
5 years agoMerge branch '15499-container-reuse-fix' refs #15499
Peter Amstutz [Tue, 10 Sep 2019 14:56:09 +0000 (10:56 -0400)]
Merge branch '15499-container-reuse-fix' refs #15499

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15499: Create additional unmodified log collection on finalize!
Peter Amstutz [Mon, 9 Sep 2019 19:37:32 +0000 (15:37 -0400)]
15499: Create additional unmodified log collection on finalize!

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoAdd CurrentApiClient to User fix login failure refs #15558
Peter Amstutz [Mon, 9 Sep 2019 17:17:31 +0000 (13:17 -0400)]
Add CurrentApiClient to User fix login failure refs #15558

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15499: Make reuse tests fail to expose the bug.
Lucas Di Pentima [Fri, 6 Sep 2019 21:28:39 +0000 (18:28 -0300)]
15499: Make reuse tests fail to expose the bug.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch '15558-alternate-email-addresses' refs #15558
Peter Amstutz [Thu, 5 Sep 2019 21:42:30 +0000 (17:42 -0400)]
Merge branch '15558-alternate-email-addresses' refs #15558

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch 'master' into 15558-alternate-email-addresses
Peter Amstutz [Thu, 5 Sep 2019 21:27:43 +0000 (17:27 -0400)]
Merge branch 'master' into 15558-alternate-email-addresses

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '15361-acr-create-workflow' refs #15361
Peter Amstutz [Thu, 5 Sep 2019 20:32:35 +0000 (16:32 -0400)]
Merge branch '15361-acr-create-workflow' refs #15361

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Fix tests
Peter Amstutz [Thu, 5 Sep 2019 19:00:54 +0000 (15:00 -0400)]
15558: Fix tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '15529-federated-user-accounts' refs #15529
Peter Amstutz [Thu, 5 Sep 2019 18:38:20 +0000 (14:38 -0400)]
Merge branch '15529-federated-user-accounts' refs #15529

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15361: Add missing test files
Peter Amstutz [Thu, 5 Sep 2019 18:32:27 +0000 (14:32 -0400)]
15361: Add missing test files

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Only set identity_url when creating new user record
Peter Amstutz [Thu, 5 Sep 2019 18:24:07 +0000 (14:24 -0400)]
15558: Only set identity_url when creating new user record

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15529: LoginCluster uses ApiClientAuthorization.remote_host
Peter Amstutz [Thu, 5 Sep 2019 17:16:26 +0000 (13:16 -0400)]
15529: LoginCluster uses ApiClientAuthorization.remote_host

Fix misspellings.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Fix duplicate identity_url in test fixtures
Peter Amstutz [Thu, 5 Sep 2019 16:12:15 +0000 (12:12 -0400)]
15558: Fix duplicate identity_url in test fixtures

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15361: Update cwltool/schema salad versions
Peter Amstutz [Thu, 5 Sep 2019 15:35:37 +0000 (11:35 -0400)]
15361: Update cwltool/schema salad versions

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Enforce uniqueness on identity_url
Peter Amstutz [Thu, 5 Sep 2019 15:19:58 +0000 (11:19 -0400)]
15558: Enforce uniqueness on identity_url

Exactly one user record can have a given identity_url.  This is
already the case in practice, now it is enforced.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '15605-goamz-update'
Lucas Di Pentima [Thu, 5 Sep 2019 15:15:33 +0000 (12:15 -0300)]
Merge branch '15605-goamz-update'
Closes #15605

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago15605: Updates vendor.json to use the latest goamz version.
Lucas Di Pentima [Thu, 5 Sep 2019 14:40:37 +0000 (11:40 -0300)]
15605: Updates vendor.json to use the latest goamz version.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch 'master' into 15558-alternate-email-addresses
Peter Amstutz [Wed, 4 Sep 2019 20:10:34 +0000 (16:10 -0400)]
Merge branch 'master' into 15558-alternate-email-addresses

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: email address must refer to unique user account
Peter Amstutz [Wed, 4 Sep 2019 19:52:40 +0000 (15:52 -0400)]
15558: email address must refer to unique user account

Email address must unambigiously refer to one user account, after
following redirects.

Make email address field read-only by non-admins.

Also fix tests and add a few new ones.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '15583-no-count'
Eric Biagiotti [Wed, 28 Aug 2019 19:59:39 +0000 (15:59 -0400)]
Merge branch '15583-no-count'

refs #15583

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years agoMerge branch '15554-python-sdk-constants'
Tom Morris [Wed, 28 Aug 2019 15:49:23 +0000 (11:49 -0400)]
Merge branch '15554-python-sdk-constants'

refs #15554

Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>

5 years ago15554 - Add Python SDK constants for container request states
Tom Morris [Wed, 28 Aug 2019 15:13:21 +0000 (11:13 -0400)]
15554 - Add Python SDK constants for container request states

Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>

5 years ago15583: Adds more with_counts to queries
Eric Biagiotti [Wed, 28 Aug 2019 13:26:50 +0000 (09:26 -0400)]
15583: Adds more with_counts to queries

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years agoMerge branch '14712-git-httpd-config'
Eric Biagiotti [Tue, 27 Aug 2019 16:01:03 +0000 (12:01 -0400)]
Merge branch '14712-git-httpd-config'

refs #14712

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Fixes default config and install doc
Eric Biagiotti [Tue, 27 Aug 2019 14:59:41 +0000 (10:59 -0400)]
14712: Fixes default config and install doc

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Updates arv-git-httpd documentation
Eric Biagiotti [Mon, 26 Aug 2019 18:04:06 +0000 (14:04 -0400)]
14712: Updates arv-git-httpd documentation

Also includes a small fix for keepproxy install docs

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Adds legacy config test
Eric Biagiotti [Mon, 26 Aug 2019 16:35:49 +0000 (12:35 -0400)]
14712: Adds legacy config test

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Tests use cluster config
Eric Biagiotti [Mon, 26 Aug 2019 15:54:43 +0000 (11:54 -0400)]
14712: Tests use cluster config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Fixes tests
Eric Biagiotti [Mon, 26 Aug 2019 14:44:23 +0000 (10:44 -0400)]
14712: Fixes tests

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Cleans up arv-git arvbox setup
Eric Biagiotti [Mon, 26 Aug 2019 14:43:55 +0000 (10:43 -0400)]
14712: Cleans up arv-git arvbox setup

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Updates arvbox and run_test_server with arv git cluster config
Eric Biagiotti [Mon, 19 Aug 2019 17:57:27 +0000 (13:57 -0400)]
14712: Updates arvbox and run_test_server with arv git cluster config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: arv-git-httpd uses cluster config
Eric Biagiotti [Fri, 16 Aug 2019 18:54:30 +0000 (14:54 -0400)]
14712: arv-git-httpd uses cluster config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14712: Adds arv-git-httpd to cluster config loading
Eric Biagiotti [Fri, 16 Aug 2019 15:40:14 +0000 (11:40 -0400)]
14712: Adds arv-git-httpd to cluster config loading

Also removes assert path  from service file

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>
14712:

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15583: Add with_count('none') more places
Peter Amstutz [Thu, 22 Aug 2019 19:04:14 +0000 (15:04 -0400)]
15583: Add with_count('none') more places

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15583: Set with_count('none') on wb page notification tests
Peter Amstutz [Thu, 22 Aug 2019 18:47:44 +0000 (14:47 -0400)]
15583: Set with_count('none') on wb page notification tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '14715-keepprox-config'
Eric Biagiotti [Thu, 22 Aug 2019 15:50:53 +0000 (11:50 -0400)]
Merge branch '14715-keepprox-config'

refs #14715

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15558: Add tests for user lookup by alternate email
Peter Amstutz [Thu, 22 Aug 2019 15:30:46 +0000 (11:30 -0400)]
15558: Add tests for user lookup by alternate email

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14715: Adds config option warning to upgrade notes
Eric Biagiotti [Thu, 22 Aug 2019 15:26:22 +0000 (11:26 -0400)]
14715: Adds config option warning to upgrade notes

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15529: Prevent local login when LoginCluster is set
Peter Amstutz [Thu, 22 Aug 2019 13:49:11 +0000 (09:49 -0400)]
15529: Prevent local login when LoginCluster is set

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15529: Add test
Peter Amstutz [Thu, 22 Aug 2019 13:44:09 +0000 (09:44 -0400)]
15529: Add test

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15529: Add some checks to login method
Peter Amstutz [Thu, 22 Aug 2019 13:25:52 +0000 (09:25 -0400)]
15529: Add some checks to login method

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15529: Redirect to LoginCluster
Peter Amstutz [Wed, 21 Aug 2019 20:27:58 +0000 (16:27 -0400)]
15529: Redirect to LoginCluster

Add tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14715: Fixes keepproxy config migration doc
Eric Biagiotti [Tue, 20 Aug 2019 21:27:13 +0000 (17:27 -0400)]
14715: Fixes keepproxy config migration doc

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15529: Support for LoginCluster and RemoteTokenRefresh
Peter Amstutz [Mon, 19 Aug 2019 18:32:03 +0000 (14:32 -0400)]
15529: Support for LoginCluster and RemoteTokenRefresh

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Tweak logic
Peter Amstutz [Tue, 20 Aug 2019 20:05:00 +0000 (16:05 -0400)]
15558: Tweak logic

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15558: Support login to user account by email address
Peter Amstutz [Mon, 19 Aug 2019 18:32:03 +0000 (14:32 -0400)]
15558: Support login to user account by email address

Can also login through aliases supplied as "alternate_emails".

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14715: Fixes install and config migration docs
Eric Biagiotti [Thu, 15 Aug 2019 18:25:29 +0000 (14:25 -0400)]
14715: Fixes install and config migration docs

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14715: Moves legacy config test to lib/config
Eric Biagiotti [Wed, 14 Aug 2019 19:23:12 +0000 (15:23 -0400)]
14715: Moves legacy config test to lib/config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14715: Fixes error handling
Eric Biagiotti [Wed, 14 Aug 2019 18:35:45 +0000 (14:35 -0400)]
14715: Fixes error handling

Also removes the path assertion from the service file and fixes copy/paste typo

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15361: Skip unecessary checklinks
Peter Amstutz [Wed, 14 Aug 2019 17:30:40 +0000 (13:30 -0400)]
15361: Skip unecessary checklinks

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch 'master' into 14715-keepprox-config
Eric Biagiotti [Wed, 14 Aug 2019 14:49:48 +0000 (10:49 -0400)]
Merge branch 'master' into 14715-keepprox-config

refs #14715

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years agoMerge branch '15486-crunchstat-summary-v1.4-support'
Tom Morris [Tue, 13 Aug 2019 21:30:59 +0000 (17:30 -0400)]
Merge branch '15486-crunchstat-summary-v1.4-support'

Fixes #15486

Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>

5 years ago15361: Add tests for --create-workflow bugfixes
Peter Amstutz [Tue, 13 Aug 2019 21:06:07 +0000 (17:06 -0400)]
15361: Add tests for --create-workflow bugfixes

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15486: Fix crunchstat-summary to work with Arvados v1.4+
Tom Morris [Thu, 25 Jul 2019 21:01:40 +0000 (17:01 -0400)]
15486: Fix crunchstat-summary to work with Arvados v1.4+

Arvados v1.4 changed things so that container logs are no longer
accessible via PDH so we need to go to the container request and
access the log via UUID from there.

Arvados-DCO-1.1-Signed-off-by: Tom Morris <tfmorris@veritasgenetics.com>

5 years agoFix arvbox keepproxy ExternalURL no issue #
Peter Amstutz [Tue, 13 Aug 2019 19:12:26 +0000 (15:12 -0400)]
Fix arvbox keepproxy ExternalURL no issue #

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '10998-keepweb-block-cache-size'
Lucas Di Pentima [Tue, 13 Aug 2019 18:56:30 +0000 (15:56 -0300)]
Merge branch '10998-keepweb-block-cache-size'
Closes #10998

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoDelete crunch-dispatch.rb stub as requested by ops refs #15133
Peter Amstutz [Tue, 13 Aug 2019 18:49:47 +0000 (14:49 -0400)]
Delete crunch-dispatch.rb stub as requested by ops refs #15133

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoarvbox add InternalURLs for services, nginx proxy for keepproxy.
Peter Amstutz [Tue, 13 Aug 2019 18:39:53 +0000 (14:39 -0400)]
arvbox add InternalURLs for services, nginx proxy for keepproxy.

no issue #

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years agoMerge branch '14716-doc-fixes'
Lucas Di Pentima [Tue, 13 Aug 2019 18:21:29 +0000 (15:21 -0300)]
Merge branch '14716-doc-fixes'
Closes #14716

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Fixes on documentation.
Lucas Di Pentima [Tue, 13 Aug 2019 18:20:43 +0000 (15:20 -0300)]
14716: Fixes on documentation.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago10998: Sets up keepclient's block cache at handler's initialization.
Lucas Di Pentima [Tue, 13 Aug 2019 17:14:39 +0000 (14:14 -0300)]
10998: Sets up keepclient's block cache at handler's initialization.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago10998: Adds test to confirm that keepclient's block cache is set up.
Lucas Di Pentima [Tue, 13 Aug 2019 17:14:04 +0000 (14:14 -0300)]
10998: Adds test to confirm that keepclient's block cache is set up.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago10998: Adds Collections.WebDAVCache.MaxBlockEntries config knob.
Lucas Di Pentima [Tue, 13 Aug 2019 17:12:59 +0000 (14:12 -0300)]
10998: Adds Collections.WebDAVCache.MaxBlockEntries config knob.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch '15516-fix-arvados-server-dependencies'
Ward Vandewege [Tue, 13 Aug 2019 16:53:27 +0000 (12:53 -0400)]
Merge branch '15516-fix-arvados-server-dependencies'

closes #15516

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

5 years ago15516: Merge branch 'master' into 15516-fix-arvados-server-dependencies
Ward Vandewege [Tue, 13 Aug 2019 16:52:53 +0000 (12:52 -0400)]
15516: Merge branch 'master' into 15516-fix-arvados-server-dependencies

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

5 years ago15516: document the use of variables with the nameref argument set.
Ward Vandewege [Tue, 13 Aug 2019 16:41:27 +0000 (12:41 -0400)]
15516: document the use of variables with the nameref argument set.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

5 years ago15361: handling imports wip
Peter Amstutz [Tue, 13 Aug 2019 16:27:01 +0000 (12:27 -0400)]
15361: handling imports wip

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14716: Rearranges sections: install, configure, run keep-web.
Lucas Di Pentima [Tue, 13 Aug 2019 16:04:56 +0000 (13:04 -0300)]
14716: Rearranges sections: install, configure, run keep-web.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Fixes install documentation.
Lucas Di Pentima [Tue, 13 Aug 2019 15:55:20 +0000 (12:55 -0300)]
14716: Fixes install documentation.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago15516: various fixes:
Ward Vandewege [Tue, 13 Aug 2019 14:36:53 +0000 (10:36 -0400)]
15516: various fixes:
* make it possible to supply --debug to run-build-test-packages-one-target.sh
* replace hardcoded /dev/null in a few places in run-build-packages.sh
* make sure get_complete_package_name() does not abort the program when optional
  parameters are not supplied, in the case where set -e is set

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

5 years agoMerge branch '14716-webdav-cluster-config'
Lucas Di Pentima [Tue, 13 Aug 2019 14:32:11 +0000 (11:32 -0300)]
Merge branch '14716-webdav-cluster-config'
Refs #14716

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Removes legacy config file existance check.
Lucas Di Pentima [Tue, 13 Aug 2019 14:31:16 +0000 (11:31 -0300)]
14716: Removes legacy config file existance check.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch 'master' into 14716-webdav-cluster-config
Lucas Di Pentima [Mon, 12 Aug 2019 20:47:26 +0000 (17:47 -0300)]
Merge branch 'master' into 14716-webdav-cluster-config

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Fixes config type init function naming.
Lucas Di Pentima [Mon, 12 Aug 2019 20:43:44 +0000 (17:43 -0300)]
14716: Fixes config type init function naming.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago15516: Fix the arvados-server buildtime dependency for the arvados-workbench
Ward Vandewege [Fri, 9 Aug 2019 19:25:23 +0000 (15:25 -0400)]
15516: Fix the arvados-server buildtime dependency for the arvados-workbench
package, and the runtime dependency for arvados-workbench and
arvados-api-server.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <wvandewege@veritasgenetics.com>

5 years ago14716: Moves keep-web legacy config loading test to lib/config.
Lucas Di Pentima [Mon, 12 Aug 2019 20:38:04 +0000 (17:38 -0300)]
14716: Moves keep-web legacy config loading test to lib/config.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14715: keepproxy.service checks for cluster config
Eric Biagiotti [Mon, 12 Aug 2019 19:41:00 +0000 (15:41 -0400)]
14715: keepproxy.service checks for cluster config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14715: Updates keepproxy documentation
Eric Biagiotti [Mon, 12 Aug 2019 19:40:26 +0000 (15:40 -0400)]
14715: Updates keepproxy documentation

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14716: Removes test config loading func that short-circuited load mechanism.
Lucas Di Pentima [Mon, 12 Aug 2019 18:42:41 +0000 (15:42 -0300)]
14716: Removes test config loading func that short-circuited load mechanism.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Fixes on config loading.
Lucas Di Pentima [Mon, 12 Aug 2019 18:42:01 +0000 (15:42 -0300)]
14716: Fixes on config loading.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch '15522-arvmount-ops-encoding'
Eric Biagiotti [Mon, 12 Aug 2019 15:19:53 +0000 (11:19 -0400)]
Merge branch '15522-arvmount-ops-encoding'

refs #15522

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14716: Fixes yaml lib being used.
Lucas Di Pentima [Mon, 12 Aug 2019 14:46:06 +0000 (11:46 -0300)]
14716: Fixes yaml lib being used.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years agoMerge branch '15133-remove-jobs-api' refs #15133
Peter Amstutz [Mon, 12 Aug 2019 14:36:31 +0000 (10:36 -0400)]
Merge branch '15133-remove-jobs-api' refs #15133

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Re-add a stub crunch-dispatch.rb to make upgrade smoother
Peter Amstutz [Mon, 12 Aug 2019 14:31:35 +0000 (10:31 -0400)]
15133: Re-add a stub crunch-dispatch.rb to make upgrade smoother

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Can't edit pipeline descriptions any more.
Peter Amstutz [Mon, 12 Aug 2019 14:15:00 +0000 (10:15 -0400)]
15133: Can't edit pipeline descriptions any more.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Fix migration
Peter Amstutz [Mon, 12 Aug 2019 14:06:50 +0000 (10:06 -0400)]
15133: Fix migration

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14715: Adds legacy config test
Eric Biagiotti [Mon, 12 Aug 2019 13:06:29 +0000 (09:06 -0400)]
14715: Adds legacy config test

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15453: Don't use "*" as a real remote. Return 502 for remote errors.
Tom Clegg [Wed, 7 Aug 2019 19:09:35 +0000 (15:09 -0400)]
15453: Don't use "*" as a real remote. Return 502 for remote errors.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tclegg@veritasgenetics.com>

5 years ago14716: Removes duplicated key from a past merge.
Lucas Di Pentima [Sat, 10 Aug 2019 00:34:56 +0000 (21:34 -0300)]
14716: Removes duplicated key from a past merge.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14716: Fixes install documentation.
Lucas Di Pentima [Sat, 10 Aug 2019 00:30:55 +0000 (21:30 -0300)]
14716: Fixes install documentation.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago15133: Remove some more failing workbench tests for job/pipeline
Peter Amstutz [Fri, 9 Aug 2019 20:38:02 +0000 (16:38 -0400)]
15133: Remove some more failing workbench tests for job/pipeline

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14716: Sets empty anonymous token on failing wb integration tests.
Lucas Di Pentima [Fri, 9 Aug 2019 19:32:43 +0000 (16:32 -0300)]
14716: Sets empty anonymous token on failing wb integration tests.

Also reverts the previous commit.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago14715: Fixes keepproxy tests
Eric Biagiotti [Fri, 9 Aug 2019 19:27:38 +0000 (15:27 -0400)]
14715: Fixes keepproxy tests

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago14715: Updates arvbox with new keepproxy cluster config
Eric Biagiotti [Fri, 9 Aug 2019 19:24:54 +0000 (15:24 -0400)]
14715: Updates arvbox with new keepproxy cluster config

Arvados-DCO-1.1-Signed-off-by: Eric Biagiotti <ebiagiotti@veritasgenetics.com>

5 years ago15133: Remove 'arv run' and 'arv pipeline' from arvados-client
Peter Amstutz [Fri, 9 Aug 2019 19:10:52 +0000 (15:10 -0400)]
15133: Remove 'arv run' and 'arv pipeline' from arvados-client

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Disallow creating/updating jobs API records in model
Peter Amstutz [Fri, 9 Aug 2019 19:01:28 +0000 (15:01 -0400)]
15133: Disallow creating/updating jobs API records in model

Remove a bunch more tests.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Add read-only jobs API to release notes
Peter Amstutz [Fri, 9 Aug 2019 18:16:10 +0000 (14:16 -0400)]
15133: Add read-only jobs API to release notes

Also remove "crunchrunner" from package build.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago14716: Fixes wb integration test.
Lucas Di Pentima [Fri, 9 Aug 2019 17:04:31 +0000 (14:04 -0300)]
14716: Fixes wb integration test.

Now that we have an unified Users.AnonymousUserToken setting active for the
integration tests, workbench started to show the 'Browse public projects'
menu item.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <ldipentima@veritasgenetics.com>

5 years ago15133: Delete crunch v1 from arvbox
Peter Amstutz [Fri, 9 Aug 2019 15:40:20 +0000 (11:40 -0400)]
15133: Delete crunch v1 from arvbox

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

5 years ago15133: Remove more referencesto arv-run and arv-run-pipeline-instance
Peter Amstutz [Fri, 9 Aug 2019 15:34:02 +0000 (11:34 -0400)]
15133: Remove more referencesto arv-run and arv-run-pipeline-instance

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>