15361: Skip unecessary checklinks
authorPeter Amstutz <pamstutz@veritasgenetics.com>
Wed, 14 Aug 2019 17:30:40 +0000 (13:30 -0400)
committerPeter Amstutz <pamstutz@veritasgenetics.com>
Wed, 14 Aug 2019 17:30:40 +0000 (13:30 -0400)
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

sdk/cwl/arvados_cwl/runner.py

index 4ca010bab1dbba1c8b9f135c228492e4d0ab7dcf..19a6dd98b332c6dbc8363e989104a075cf90f587 100644 (file)
@@ -334,7 +334,7 @@ def upload_dependencies(arvrunner, name, document_loader,
                                  builder_job_order,
                                  discovered)
 
-    copied, _ = document_loader.resolve_all(copy.deepcopy(cmap(workflowobj)), base_url=uri)
+    copied, _ = document_loader.resolve_all(copy.deepcopy(cmap(workflowobj)), base_url=uri, checklinks=False)
     visit_class(copied, ("CommandLineTool", "Workflow"), discover_default_secondary_files)
 
     for d in list(discovered):