mishaz [Tue, 14 Oct 2014 22:11:40 +0000 (22:11 +0000)]
Modified IndexHandler to match TrashHandler and PullHandler
* No longer checks for the enforce-permissions flag.
* Still checks for DataManager auth token.
* The HTTP error returned when we don't find the DataManager auth token is now Unauthorized instead of Forbidden.
Brett Smith [Wed, 15 Oct 2014 13:22:40 +0000 (09:22 -0400)]
4196: arv-keepdocker uses Docker 1.0 pull syntax.
`docker pull -t` was the old way of pulling an image with a specific
tag. Docker 1.0 introduced `docker pull repo:tag`, and Docker 1.2
removes support for `-t` completely. We're well-standardized on 1.1+
at this point, and considering an upgrade to 1.2+, so now's the time
to switch.
Brett Smith [Mon, 13 Oct 2014 19:19:15 +0000 (15:19 -0400)]
4139: Speed up Node Manager tests.
Previously, the tests would poll interesting mocks, waiting for them
to be called. This introduces significant overhead to the tests, and
they would frequently time out on Jenkins. This modifies the tests to
get more information by blocking on the tested actors, which means
more predictability and less fighting for CPU (typical runtimes for
all the tests improved from 5 seconds to 0.5 seconds on my
workstation).
The downside to this approach is that it ties the tests more tightly
to the underlying actors' implementation. In particular, they
sometimes send a message and block for a response to ensure that any
internal messages generated by the *last* message have been handled.
This is less than ideal, but I don't have a better idea right now.
Peter Amstutz [Fri, 10 Oct 2014 19:43:52 +0000 (15:43 -0400)]
Websocket server side fix, perform database notify in after_save callback on
the log object instead of in log_change on ArvadosBase because crunch-dispatch
was creating Log objects directly and bypassing the notification in log_change.
Brett Smith [Thu, 9 Oct 2014 17:32:50 +0000 (13:32 -0400)]
4139: Add *.egg to Node Manager's .gitignore.
`python setup.py test` will automatically download dependencies to the
source directory if you don't already have them available in your
environment. Refs #2881, #4139.
Brett Smith [Thu, 9 Oct 2014 17:31:47 +0000 (13:31 -0400)]
4139: Add environment configuration knobs for Node Manager tests.
These are settings I've fiddled with regularly over the course of
development, and now it looks like we're going to need to fiddle them
some more to accommodate Jenkins. I'm exposing them as environment
variables so I can stop messing with the code appropriately.
Refs #4139.
Peter Amstutz [Thu, 9 Oct 2014 13:32:36 +0000 (09:32 -0400)]
4042: Typo fixes. Highlight run-command and script_parameters in text. Rename
--job-parameters to --script-parameters and add mention of --dry-run mode.
Tim Pierce [Wed, 8 Oct 2014 21:45:24 +0000 (17:45 -0400)]
3699: bug fix: use destination permission hints
Fix copy_collection permission bug: when copying collections, the
manifest in the collection created at the destination must have
permission hints returned by the destination Keep server.
Also fixed bug in arvados.keep.KeepClient (use the api_client's API
token when one is specified)
Peter Amstutz [Wed, 8 Oct 2014 18:50:12 +0000 (14:50 -0400)]
Merge branch '4042-run-command-MxN' of git.curoverse.com:arvados into 4042-run-command-MxN
# Please enter a commit message to explain why this merge is necessary,
# especially if it merges an updated upstream into a topic branch.
#
# Lines starting with '#' will be ignored, and an empty message aborts
# the commit.
Peter Amstutz [Wed, 8 Oct 2014 15:12:57 +0000 (11:12 -0400)]
4042: Rename bad reuse of 'p' to 'match' in expand_item. Finish describing
$(task.outdir). Clarify that list functions take a user parameter name. Fix
other spelling and grammatical errors in documentation.
Tom Clegg [Tue, 7 Oct 2014 20:24:15 +0000 (16:24 -0400)]
4044: Clean up channel and pipe usage.
* Remove code for using one goroutine to copy stdout and stderr from
channels to pipes. Instead, copy stderr from channel to pipe in a
simple goroutine, and use give the child our own Stdout to use (we
don't use it ourselves anyway).
radhika [Tue, 7 Oct 2014 17:55:32 +0000 (13:55 -0400)]
3882: update "after_validation :update_timestamps_when_state_changes" to "before_save :update_timestamps_when_state_changes",
and also add comple more test combinations around cancelled state.
Tom Clegg [Tue, 7 Oct 2014 02:06:50 +0000 (22:06 -0400)]
3775: Update perlpod. Use items_available. Be more conservative when
using already-cached commit sha1s, expand related comment. Move "skip
if not possible now" checks into subroutines.
Brett Smith [Mon, 6 Oct 2014 21:36:31 +0000 (17:36 -0400)]
3634: Update user setup tests for preserved tab state.
These tests assume that the page reloads after submitting Ajax
dialogs. They started failing when we started preserving tab state.
Update the tests to expressly refresh the page. Future improvements
might find a solution with lower overhead.
Peter Amstutz [Mon, 6 Oct 2014 19:03:37 +0000 (15:03 -0400)]
3381: Merge job_status_label and job_progress into a single job_progress
partial. This partial renders a progress bar if the job is running, otherwise
renders a label with the job state. The progress bar now shows only 'done'
tasks and renders the progress bar in orange if any tasks have failed. Move
"done, failure, running, todo" from panel body to panel heading on
running_component partial. Dashboard now uses job_progress partial with
"scaleby" to indicate pipeline progress more precisely.
Tim Pierce [Mon, 6 Oct 2014 17:24:47 +0000 (13:24 -0400)]
3825: code review
* avoid overloading "output" (usually used for the output from a task or job than for diagnostic output from crunch)
** renamed:
*** start_output_log -> log_writer_start
*** write_output_log -> log_writer_send
*** finish_output_log -> log_writer_finish
*** output_log_is_active -> log_writer_is_active
* fixed missing semicolon