arvados.git
3 months agoMerge branch '19146-can-write-manage'
Tom Clegg [Mon, 13 Jun 2022 18:30:59 +0000 (14:30 -0400)]
Merge branch '19146-can-write-manage'

refs #19146

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months ago19146: Remove unneeded special case checks, explain the needed one.
Tom Clegg [Fri, 10 Jun 2022 15:44:33 +0000 (11:44 -0400)]
19146: Remove unneeded special case checks, explain the needed one.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months agoMerge branch '19177-sharing-links-ui-config'. Refs #19177
Lucas Di Pentima [Fri, 10 Jun 2022 14:57:35 +0000 (11:57 -0300)]
Merge branch '19177-sharing-links-ui-config'. Refs #19177

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

3 months ago19177: Fixes tests.
Lucas Di Pentima [Wed, 8 Jun 2022 18:54:26 +0000 (15:54 -0300)]
19177: Fixes tests.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

3 months agoMerge branch '19145-admin-write-frozen'
Tom Clegg [Wed, 8 Jun 2022 13:37:23 +0000 (09:37 -0400)]
Merge branch '19145-admin-write-frozen'

fixes #19145

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months ago19177: Adds test to wb1 for sharing link button hideability.
Lucas Di Pentima [Wed, 8 Jun 2022 13:21:52 +0000 (10:21 -0300)]
19177: Adds test to wb1 for sharing link button hideability.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

3 months ago19177: Do not show the collection's sharing button on wb1 when it shouldn't.
Lucas Di Pentima [Wed, 8 Jun 2022 12:59:02 +0000 (09:59 -0300)]
19177: Do not show the collection's sharing button on wb1 when it shouldn't.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

3 months ago19177: Adds config to disable sharing links UI on workbenches.
Lucas Di Pentima [Wed, 8 Jun 2022 12:31:50 +0000 (09:31 -0300)]
19177: Adds config to disable sharing links UI on workbenches.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

3 months ago19146: Add can_write/can_manage to users#list, fix select=can_*.
Tom Clegg [Tue, 7 Jun 2022 15:09:57 +0000 (11:09 -0400)]
19146: Add can_write/can_manage to users#list, fix select=can_*.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months ago19146: Update userAttrsCachedFromLoginCluster.
Tom Clegg [Tue, 7 Jun 2022 14:12:26 +0000 (10:12 -0400)]
19146: Update userAttrsCachedFromLoginCluster.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months ago19146: Add can_write and can_manage response fields.
Tom Clegg [Mon, 6 Jun 2022 15:27:52 +0000 (11:27 -0400)]
19146: Add can_write and can_manage response fields.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

3 months ago19145: Make frozen projects non-writable by admins.
Tom Clegg [Mon, 6 Jun 2022 14:01:48 +0000 (10:01 -0400)]
19145: Make frozen projects non-writable by admins.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19175-doc-refactor-multi-host-installation'
Ward Vandewege [Fri, 3 Jun 2022 23:44:11 +0000 (19:44 -0400)]
Merge branch '19175-doc-refactor-multi-host-installation'

closes #19175

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19175: Merge branch 'main' into 19175-doc-refactor-multi-host-installation
Ward Vandewege [Fri, 3 Jun 2022 23:43:44 +0000 (19:43 -0400)]
19175: Merge branch 'main' into 19175-doc-refactor-multi-host-installation

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoMore Salt installer doc refactoring.
Ward Vandewege [Thu, 2 Jun 2022 20:58:26 +0000 (16:58 -0400)]
More Salt installer doc refactoring.

refs #19175

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoFix a few typos in the help text.
Ward Vandewege [Thu, 2 Jun 2022 20:55:36 +0000 (16:55 -0400)]
Fix a few typos in the help text.

refs #19175

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoMerge branch '15370-loopback-dispatchcloud'
Tom Clegg [Thu, 2 Jun 2022 18:39:18 +0000 (14:39 -0400)]
Merge branch '15370-loopback-dispatchcloud'

closes #15370

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoFix 2.4.1 release date refs #19017
Peter Amstutz [Thu, 2 Jun 2022 14:37:05 +0000 (10:37 -0400)]
Fix 2.4.1 release date refs #19017

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoRefactor the multi-host salt install page.
Ward Vandewege [Thu, 2 Jun 2022 17:39:05 +0000 (13:39 -0400)]
Refactor the multi-host salt install page.

refs #19175

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago15370: Bump docker API version to 1.35.
Tom Clegg [Thu, 2 Jun 2022 15:56:33 +0000 (11:56 -0400)]
15370: Bump docker API version to 1.35.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoDocumentation: fix typo.
Ward Vandewege [Wed, 1 Jun 2022 20:12:17 +0000 (16:12 -0400)]
Documentation: fix typo.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoAdd 2nd NVIDIA repo key
Peter Amstutz [Wed, 1 Jun 2022 19:34:04 +0000 (15:34 -0400)]
Add 2nd NVIDIA repo key

refs #19017

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoProvision script fix: clarify that the cluster id must be 5 lowercase
Ward Vandewege [Wed, 1 Jun 2022 16:17:16 +0000 (12:17 -0400)]
Provision script fix: clarify that the cluster id must be 5 lowercase
alphanumeric characters.

refs #19169

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoIn the config loader, we require the cluster id to be specified in
Ward Vandewege [Wed, 1 Jun 2022 16:11:49 +0000 (12:11 -0400)]
In the config loader, we require the cluster id to be specified in
lowercase. Clarify this in the error message when the cluster id is not
valid.

refs #19169

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoMerge branch '19169-provision-fix-single-hostname-letsencrypt'
Ward Vandewege [Wed, 1 Jun 2022 15:54:06 +0000 (11:54 -0400)]
Merge branch '19169-provision-fix-single-hostname-letsencrypt'

refs #19169

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoprovision script: fix single host/single hostname letsencrypt.
Ward Vandewege [Wed, 1 Jun 2022 14:15:23 +0000 (10:15 -0400)]
provision script: fix single host/single hostname letsencrypt.

refs #19169

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19144: Resets storage_classes_confirmed* fields on WB1 copy action.
Lucas Di Pentima [Thu, 26 May 2022 18:26:17 +0000 (15:26 -0300)]
19144: Resets storage_classes_confirmed* fields on WB1 copy action.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

4 months ago15370: Fix up debug logs.
Tom Clegg [Tue, 31 May 2022 14:59:31 +0000 (10:59 -0400)]
15370: Fix up debug logs.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Ensure keep data dirs exists for test.
Tom Clegg [Tue, 31 May 2022 14:27:00 +0000 (10:27 -0400)]
15370: Ensure keep data dirs exists for test.

...instead of assuming some other test suite has created them by
calling arvadostest.StartKeep().

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Allow 20m for arvados-package tests.
Tom Clegg [Tue, 31 May 2022 13:53:34 +0000 (09:53 -0400)]
15370: Allow 20m for arvados-package tests.

First run is slow, with no cached docker image.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago18947: Remove obsolete go binary build steps from arvados-package.
Tom Clegg [Mon, 30 May 2022 19:32:33 +0000 (15:32 -0400)]
18947: Remove obsolete go binary build steps from arvados-package.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Fix unspecified docker API version requirement.
Tom Clegg [Mon, 30 May 2022 18:54:40 +0000 (14:54 -0400)]
15370: Fix unspecified docker API version requirement.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Fix flaky test.
Tom Clegg [Mon, 30 May 2022 18:54:25 +0000 (14:54 -0400)]
15370: Fix flaky test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Re-enable docker tests.
Tom Clegg [Mon, 30 May 2022 13:56:23 +0000 (09:56 -0400)]
15370: Re-enable docker tests.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19144-wb-copy-collections-fix'. Closes #19144
Lucas Di Pentima [Fri, 27 May 2022 14:33:42 +0000 (11:33 -0300)]
Merge branch '19144-wb-copy-collections-fix'. Closes #19144

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

4 months agoSalt installer change: standardize on putting the certs directory under
Ward Vandewege [Thu, 26 May 2022 20:42:02 +0000 (16:42 -0400)]
Salt installer change: standardize on putting the certs directory under
the local_config_dir directory, this simplifies things.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19144: Resets storage_classes_confirmed* fields on WB1 copy action.
Lucas Di Pentima [Thu, 26 May 2022 18:26:17 +0000 (15:26 -0300)]
19144: Resets storage_classes_confirmed* fields on WB1 copy action.

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

4 months agoMake compute node image script compatible with Ubuntu.
Ward Vandewege [Thu, 26 May 2022 16:34:20 +0000 (12:34 -0400)]
Make compute node image script compatible with Ubuntu.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoMerge branch '19164-add-flags'
Ward Vandewege [Thu, 26 May 2022 16:05:00 +0000 (12:05 -0400)]
Merge branch '19164-add-flags'

closes #19164

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19164: update doc accordingly.
Ward Vandewege [Thu, 26 May 2022 15:56:20 +0000 (11:56 -0400)]
19164: update doc accordingly.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19164: rework the help text for all the options of the compute image
Ward Vandewege [Thu, 26 May 2022 12:27:57 +0000 (08:27 -0400)]
19164: rework the help text for all the options of the compute image
       build script.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoRemove illegal characters (currently just '/') from output collection names
Peter Amstutz [Wed, 25 May 2022 16:52:55 +0000 (12:52 -0400)]
Remove illegal characters (currently just '/') from output collection names

refs #19152

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoProvision scripts: do not hardcode a ruby version when using RVM, use
Ward Vandewege [Wed, 25 May 2022 20:03:14 +0000 (16:03 -0400)]
Provision scripts: do not hardcode a ruby version when using RVM, use
the generic wrapper instead.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago19164: add a few flags to the compute image builder script.
Ward Vandewege [Wed, 25 May 2022 19:11:39 +0000 (15:11 -0400)]
19164: add a few flags to the compute image builder script.

No issue #

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoDisable LocalKeepBlobBuffersPerVCPU on the single node installer
Ward Vandewege [Wed, 25 May 2022 15:04:56 +0000 (11:04 -0400)]
Disable LocalKeepBlobBuffersPerVCPU on the single node installer
development config, Keep uses /tmp here.

refs #18983

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months agoMerge branch '18983-salt-installer-multinode-disable-LocalKeepBlobBuffersPerVCPU'
Ward Vandewege [Mon, 23 May 2022 18:58:03 +0000 (14:58 -0400)]
Merge branch '18983-salt-installer-multinode-disable-LocalKeepBlobBuffersPerVCPU'

refs #18983

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago18983: Disable LocalKeepBlobBuffersPerVCPU on the multinode installer
Ward Vandewege [Mon, 23 May 2022 18:30:39 +0000 (14:30 -0400)]
18983: Disable LocalKeepBlobBuffersPerVCPU on the multinode installer
       development config.

Arvados-DCO-1.1-Signed-off-by: Ward Vandewege <ward@curii.com>

4 months ago15370: Merge branch 'main' into 15370-loopback-dispatchcloud
Tom Clegg [Sat, 21 May 2022 01:28:53 +0000 (21:28 -0400)]
15370: Merge branch 'main' into 15370-loopback-dispatchcloud

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '15370-docker-tests'
Tom Clegg [Sat, 21 May 2022 01:27:12 +0000 (21:27 -0400)]
Merge branch '15370-docker-tests'

refs #15370

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Temporarily disable some docker tests.
Tom Clegg [Sat, 21 May 2022 00:56:47 +0000 (20:56 -0400)]
15370: Temporarily disable some docker tests.

See https://dev.arvados.org/issues/15370#note-31

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '16345-check-version-skew'
Tom Clegg [Fri, 20 May 2022 17:54:10 +0000 (13:54 -0400)]
Merge branch '16345-check-version-skew'

closes #16345

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19129-wb1-dashboard-speedup' refs #19129
Peter Amstutz [Fri, 20 May 2022 16:05:14 +0000 (12:05 -0400)]
Merge branch '19129-wb1-dashboard-speedup' refs #19129

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19129: add missing exit_code from select
Peter Amstutz [Fri, 20 May 2022 14:39:25 +0000 (10:39 -0400)]
19129: add missing exit_code from select

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoMerge branch '18983-warn-unused-local-keep'
Tom Clegg [Fri, 20 May 2022 14:31:40 +0000 (10:31 -0400)]
Merge branch '18983-warn-unused-local-keep'

fixes #18983

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoFix integration test refs #17004
Peter Amstutz [Thu, 19 May 2022 20:13:57 +0000 (16:13 -0400)]
Fix integration test refs #17004

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoMerge branch '19136-freeze-props-whitelist'
Tom Clegg [Thu, 19 May 2022 19:57:07 +0000 (15:57 -0400)]
Merge branch '19136-freeze-props-whitelist'

fixes #19136

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago16345: Fail health check on server version mismatch.
Tom Clegg [Thu, 19 May 2022 19:19:23 +0000 (15:19 -0400)]
16345: Fail health check on server version mismatch.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19099-singularity-container-shell'
Tom Clegg [Thu, 19 May 2022 15:26:59 +0000 (11:26 -0400)]
Merge branch '19099-singularity-container-shell'

closes #19099

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19141-nokogiri-update'. Closes #19141
Lucas Di Pentima [Thu, 19 May 2022 14:42:32 +0000 (11:42 -0300)]
Merge branch '19141-nokogiri-update'. Closes #19141

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

4 months agoMerge branch '17004-properties-on-output' refs #17004
Peter Amstutz [Thu, 19 May 2022 13:45:37 +0000 (09:45 -0400)]
Merge branch '17004-properties-on-output' refs #17004

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19141: Updates nokogiri dependencies on railsAPI & workbench1
Lucas Di Pentima [Thu, 19 May 2022 13:12:20 +0000 (10:12 -0300)]
19141: Updates nokogiri dependencies on railsAPI & workbench1

Arvados-DCO-1.1-Signed-off-by: Lucas Di Pentima <lucas.dipentima@curii.com>

4 months ago19099: Ensure host/container port conflict in IPAddress test.
Tom Clegg [Wed, 18 May 2022 21:51:54 +0000 (17:51 -0400)]
19099: Ensure host/container port conflict in IPAddress test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago17004: Move output_properties to progress_attrs
Peter Amstutz [Wed, 18 May 2022 19:50:57 +0000 (15:50 -0400)]
17004: Move output_properties to progress_attrs

Mention default properties "type" and "container_request" in docs

Fix typos on CWL arv:OutputCollectionProperties page.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago15370: Merge branch 'main' into 15370-loopback-dispatchcloud
Tom Clegg [Wed, 18 May 2022 18:01:21 +0000 (14:01 -0400)]
15370: Merge branch 'main' into 15370-loopback-dispatchcloud

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoDon't install docker in arvbox now that arvados-server install does it.
Peter Amstutz [Wed, 18 May 2022 15:44:34 +0000 (11:44 -0400)]
Don't install docker in arvbox now that arvados-server install does it.

refs #15370

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoarvbox option to override API_HOST to test with other clusters
Peter Amstutz [Tue, 17 May 2022 19:47:31 +0000 (15:47 -0400)]
arvbox option to override API_HOST to test with other clusters

no issue #

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoMerge branch '19070-cwl-test-fixing' refs #19070
Peter Amstutz [Tue, 17 May 2022 21:24:44 +0000 (17:24 -0400)]
Merge branch '19070-cwl-test-fixing' refs #19070

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19070: make some notes about why the script does things
Peter Amstutz [Tue, 17 May 2022 20:01:16 +0000 (16:01 -0400)]
19070: make some notes about why the script does things

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19070: more test_with_arvbox fixes
Peter Amstutz [Tue, 17 May 2022 19:52:14 +0000 (15:52 -0400)]
19070: more test_with_arvbox fixes

Don't try to pull or upload arvados/jobs image, a-c-r already knows
how to do that.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoMerge branch '15370-install-docker'
Tom Clegg [Tue, 17 May 2022 18:56:08 +0000 (14:56 -0400)]
Merge branch '15370-install-docker'

refs #15370

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19070: Still trying to fix test_with_arvbox
Peter Amstutz [Tue, 17 May 2022 18:45:28 +0000 (14:45 -0400)]
19070: Still trying to fix test_with_arvbox

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago15370: Add docker to development/test dependencies.
Tom Clegg [Fri, 13 May 2022 19:26:35 +0000 (15:26 -0400)]
15370: Add docker to development/test dependencies.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19070: Fixing CWL tests
Peter Amstutz [Tue, 17 May 2022 18:20:24 +0000 (14:20 -0400)]
19070: Fixing CWL tests

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoMerge branch '19081-singularity-no-eval'
Tom Clegg [Tue, 17 May 2022 18:13:34 +0000 (14:13 -0400)]
Merge branch '19081-singularity-no-eval'

refs #19081

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19136: Fix FreezeProjectRequiresProperties.* missing from whitelist.
Tom Clegg [Tue, 17 May 2022 18:11:32 +0000 (14:11 -0400)]
19136: Fix FreezeProjectRequiresProperties.* missing from whitelist.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Fix test.
Tom Clegg [Tue, 17 May 2022 18:02:46 +0000 (14:02 -0400)]
15370: Fix test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '19094-log-versions'
Tom Clegg [Tue, 17 May 2022 17:25:54 +0000 (13:25 -0400)]
Merge branch '19094-log-versions'

closes #19094

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19081: Disable singularity env var eval behavior if possible.
Tom Clegg [Tue, 17 May 2022 15:41:40 +0000 (11:41 -0400)]
19081: Disable singularity env var eval behavior if possible.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19094: Note docker/singularity/arv-mount versions in container log.
Tom Clegg [Tue, 17 May 2022 06:17:39 +0000 (02:17 -0400)]
19094: Note docker/singularity/arv-mount versions in container log.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago18983: Warn if LocalKeepBlobBuffersPerVCPU > 0 but will not be used.
Tom Clegg [Tue, 17 May 2022 05:36:06 +0000 (01:36 -0400)]
18983: Warn if LocalKeepBlobBuffersPerVCPU > 0 but will not be used.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19129: Select specific fields to speed up dashboard loading
Peter Amstutz [Mon, 16 May 2022 20:22:30 +0000 (16:22 -0400)]
19129: Select specific fields to speed up dashboard loading

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months agoBash syntax in arvados-tests.sh requires bash, fixed.
Peter Amstutz [Mon, 16 May 2022 20:11:28 +0000 (16:11 -0400)]
Bash syntax in arvados-tests.sh requires bash, fixed.

refs #19109

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19099: Remove unused singularity network permission setup.
Tom Clegg [Mon, 16 May 2022 19:15:12 +0000 (15:15 -0400)]
19099: Remove unused singularity network permission setup.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoFix set_secondary recursion error
Peter Amstutz [Mon, 16 May 2022 18:51:20 +0000 (14:51 -0400)]
Fix set_secondary recursion error

skip some problematic conformance tests in test_with_arvbox

refs #19109

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago15370: Update sync-groups test config.
Tom Clegg [Mon, 16 May 2022 18:48:04 +0000 (14:48 -0400)]
15370: Update sync-groups test config.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19099: Skip IPAddress test if it looks like we can't use --fakeroot.
Tom Clegg [Mon, 16 May 2022 18:24:02 +0000 (14:24 -0400)]
19099: Skip IPAddress test if it looks like we can't use --fakeroot.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoFix arvados-tests.sh to use python from a-c-r package if available.
Peter Amstutz [Mon, 16 May 2022 17:20:29 +0000 (13:20 -0400)]
Fix arvados-tests.sh to use python from a-c-r package if available.

Add note about the purpose of arvados-tests.sh

refs #19070

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago17004: Fix lingering resource error
Peter Amstutz [Mon, 16 May 2022 16:24:43 +0000 (12:24 -0400)]
17004: Fix lingering resource error

* Remove legacy global api_client from arv-get
* Monkey patch close_connections() method to close keepalive connections
* Use close_connections to tear down lingering connections from arv get test setup

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago15370: 19081: Check command arg quoting.
Tom Clegg [Mon, 16 May 2022 07:34:06 +0000 (03:34 -0400)]
15370: 19081: Check command arg quoting.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Split "run container request X" into test helper.
Tom Clegg [Mon, 16 May 2022 05:21:23 +0000 (01:21 -0400)]
15370: Split "run container request X" into test helper.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago15370: Disable "broken node" flag when testing with loopback.
Tom Clegg [Mon, 16 May 2022 05:18:51 +0000 (01:18 -0400)]
15370: Disable "broken node" flag when testing with loopback.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago19099: Fix typos.
Tom Clegg [Mon, 16 May 2022 03:44:40 +0000 (23:44 -0400)]
19099: Fix typos.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago17004: Test for setting final output properties from inside container
Peter Amstutz [Fri, 13 May 2022 21:51:06 +0000 (17:51 -0400)]
17004: Test for setting final output properties from inside container

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago17004: Fix setting properties on final collection
Peter Amstutz [Fri, 13 May 2022 21:27:11 +0000 (17:27 -0400)]
17004: Fix setting properties on final collection

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>

4 months ago19099: Debug singularity test.
Tom Clegg [Fri, 13 May 2022 21:12:37 +0000 (17:12 -0400)]
19099: Debug singularity test.

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '18947-dispatch-slurm'
Tom Clegg [Fri, 13 May 2022 20:53:27 +0000 (16:53 -0400)]
Merge branch '18947-dispatch-slurm'

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago18947: Merge branch 'main'
Tom Clegg [Fri, 13 May 2022 20:52:43 +0000 (16:52 -0400)]
18947: Merge branch 'main'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months agoMerge branch '18947-health'
Tom Clegg [Fri, 13 May 2022 20:50:00 +0000 (16:50 -0400)]
Merge branch '18947-health'

refs #18947

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago18947: Merge branch 'main'
Tom Clegg [Fri, 13 May 2022 20:48:36 +0000 (16:48 -0400)]
18947: Merge branch 'main'

Arvados-DCO-1.1-Signed-off-by: Tom Clegg <tom@curii.com>

4 months ago17004: Set default collection output name "Output from workflow XYZ"
Peter Amstutz [Fri, 13 May 2022 20:41:19 +0000 (16:41 -0400)]
17004: Set default collection output name "Output from workflow XYZ"

Previously this wasn't set, so the output collection would be called
"Container output for request XYZ" which is pretty meaningless to
humans.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>