projects
/
arvados.git
/ history
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
13200: test assigning __version__
[arvados.git]
/
sdk
/
cwl
/
2016-08-25
Tom Clegg
Merge branch '9705-crunch2-install-guide-wip'
tree
|
commitdiff
2016-08-23
Peter Amstutz
Merge branch '9827-no-docker-caching' closes #9827
tree
|
commitdiff
2016-08-22
Peter Amstutz
Add --compute-checksum to sdk/cwl/test_with_arvbox...
tree
|
commitdiff
2016-08-19
Peter Amstutz
Merge branch '9820-cwl-poll-jobs' closes #9820
tree
|
commitdiff
2016-08-19
Peter Amstutz
9820: Directly poll job or container records that we...
tree
|
commitdiff
2016-08-19
Tom Clegg
Merge branch '9684-workflows'
tree
|
commitdiff
2016-08-18
Lucas Di Pentima
Merge branch 'master' into 9333-api-server-invalid-sql
tree
|
commitdiff
2016-08-18
radhika
closes #9684
tree
|
commitdiff
2016-08-17
Lucas Di Pentima
Merge branch '9333-api-server-invalid-sql'
tree
|
commitdiff
2016-08-16
Peter Amstutz
9783: Report useful error if subdirectory of a collecti...
tree
|
commitdiff
2016-08-15
radhika
closes #9709
tree
|
commitdiff
2016-08-11
Peter Amstutz
Fix failing tests. refs #9776
tree
|
commitdiff
2016-08-11
Peter Amstutz
Merge branch '9776-cwl-HOME-TMPDIR' closes #9776
tree
|
commitdiff
2016-08-11
Peter Amstutz
9776: Ensure that $HOME and $TMPDIR are set correctly.
tree
|
commitdiff
2016-08-11
Peter Amstutz
Merge branch '9615-cwl-writable-unsupported' refs ...
tree
|
commitdiff
2016-08-11
Peter Amstutz
9615: Add check_writable to check for "writable" field...
tree
|
commitdiff
2016-08-11
Peter Amstutz
Merge branch '9751-cwl-keep-dir' closes #9751
tree
|
commitdiff
2016-08-11
Peter Amstutz
9552: import compute_checksums from cwltool.
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Fix handling local Directories
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Bump cwltool dependency.
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Fix unit tests. Rename dir6.cwl to keep-dir...
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Override realpath in CollectionFsAccess
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Fix direct to keep directory references.
tree
|
commitdiff
2016-08-11
Peter Amstutz
9751: Provide make_fs_access=CollectionFsAccess and...
tree
|
commitdiff
2016-08-11
radhika
closes #9678
tree
|
commitdiff
2016-08-11
radhika
closes #9658
tree
|
commitdiff
2016-08-10
radhika
9658: when arvados-cwl-runner is invoked with --api...
tree
|
commitdiff
2016-08-04
Peter Amstutz
Merge branch '9552-compute-checksum-final-output' refs...
tree
|
commitdiff
2016-08-04
Tom Clegg
Merge branch '9406-cgroup-parent'
tree
|
commitdiff
2016-08-04
Peter Amstutz
9552: If compute_checksum is true, check if checksum...
tree
|
commitdiff
2016-08-04
Ward Vandewege
Merge branch '9677-update-install-docs'
tree
|
commitdiff
2016-08-03
Peter Amstutz
Merge branch '9674-cwl-initialworkdir' closes #9674
tree
|
commitdiff
2016-08-02
Peter Amstutz
9674: InitialWorkDirPathMapper bug fix to set correct...
tree
|
commitdiff
2016-07-28
radhika
refs #9552
tree
|
commitdiff
2016-07-28
radhika
9552: add compute-checksum flag to arvados-cwl-runner
tree
|
commitdiff
2016-07-27
radhika
Merge branch 'master' into 8568-docker-version-support
tree
|
commitdiff
2016-07-27
radhika
closes #9552
tree
|
commitdiff
2016-07-27
radhika
Merge branch 'master' into 9552-compute-checksum-flag
tree
|
commitdiff
2016-07-26
Brett Smith
9659: Bump CWL SDK's versioned dependency on PySDK.
tree
|
commitdiff
2016-07-26
radhika
9552: update cwltool version, which offer compute_check...
tree
|
commitdiff
2016-07-19
Tom Clegg
Merge branch '9613-user-profile-string-keys'
tree
|
commitdiff
2016-07-18
Lucas Di Pentima
Merge branch '9438-http-default-timeout'
tree
|
commitdiff
2016-07-17
Nico Cesar
Merge branch '9614-cwl-no-websockets'
tree
|
commitdiff
2016-07-16
Peter Amstutz
9614: Don't use websockets for event notification until...
tree
|
commitdiff
2016-07-15
Peter Amstutz
Merge branch 'master' into 9369-arv-cwl-docs
tree
|
commitdiff
2016-07-15
Peter Amstutz
Merge branch '9570-cwl-runner-fixes' closes #9570 ...
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Raise exception on workflow failure.
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Use special path mapper for staging files to...
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Call normalizeFilesDirs to make sure basename...
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Adjust Directory objects, too.
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Remove spurious print statement.
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Bump cwltool dependency
tree
|
commitdiff
2016-07-15
Peter Amstutz
9570: Update cwl-runner for latest cwltool. Ensure...
tree
|
commitdiff
2016-07-13
Nico Cesar
Merge branch '9459-test_with_arvbox_tweaks'
tree
|
commitdiff
2016-07-13
Nico Cesar
9459: added test_in_arvbox.sh and arvbox the docker...
tree
|
commitdiff
2016-07-13
Tom Clegg
Merge branch '9567-keep-web-session-test'
tree
|
commitdiff
2016-07-13
Peter Amstutz
Fix tests. refs #9570
tree
|
commitdiff
2016-07-13
Peter Amstutz
Merge branch '9486-retry-instance-limit-exceeded' close...
tree
|
commitdiff
2016-07-13
Peter Amstutz
Merge branch '9570-cwl-v1.0' closes #9570
tree
|
commitdiff
2016-07-13
Peter Amstutz
9570: Set docker_outdir consistently.
tree
|
commitdiff
2016-07-13
Peter Amstutz
9570: Update version pin and add reminder to setup...
tree
|
commitdiff
2016-07-13
Peter Amstutz
9570: Fix secondaryFile staging to ensure that all...
tree
|
commitdiff
2016-07-12
Peter Amstutz
9570: Fix for Pathmapper API change. Most tests pass...
tree
|
commitdiff
2016-07-12
Peter Amstutz
9570: Support Directory and file literal features....
tree
|
commitdiff
2016-07-11
Peter Amstutz
9570: Pass tests except related to directory features
tree
|
commitdiff
2016-07-11
Peter Amstutz
9570: CWL v1.0 support wip
tree
|
commitdiff
2016-07-07
Tom Clegg
9567: Avoid ruamel.yaml >0.11.11. refs #9567
tree
|
commitdiff
2016-07-07
Tom Clegg
Revert "Bump cwltool dependency. Previously pinned...
tree
|
commitdiff
2016-07-07
Tom Clegg
Bump cwltool dependency. Previously pinned version...
tree
|
commitdiff
2016-06-30
Peter Amstutz
Update arvados-cwl-runner cwltool pin to get ruamel...
tree
|
commitdiff
2016-06-29
Peter Amstutz
Merge branch '9511-cwl-type-checking' closes #9511
tree
|
commitdiff
2016-06-29
Peter Amstutz
9511: Bump cwltool dependency to get bugfix (81ff56f239...
tree
|
commitdiff
2016-06-28
Peter Amstutz
Merge branch '9442-cwl-runtime-outdir' closes #9442
tree
|
commitdiff
2016-06-28
Peter Amstutz
9442: Incorporate check for correct $(runtime.outdir...
tree
|
commitdiff
2016-06-28
Peter Amstutz
9442: Fix runtime.outdir for containers.
tree
|
commitdiff
2016-06-28
Peter Amstutz
9442: Override kwargs["outdir"] so that $(runtime.outdi...
tree
|
commitdiff
2016-06-27
Lucas Di Pentima
Merge branch '9446-refactor-keep-parallel-write-strategy'
tree
|
commitdiff
2016-06-22
Peter Amstutz
Merge branch 'origin-8442-cwl-crunch2' closes #8442
tree
|
commitdiff
2016-06-22
Peter Amstutz
Merge branch 'master' into origin-8442-cwl-crunch2
tree
|
commitdiff
2016-06-22
Peter Amstutz
8442: Code cleanup. Remove dead code. Update comments.
tree
|
commitdiff
2016-06-21
Peter Amstutz
8442: Fix error reporting on missing Docker image
tree
|
commitdiff
2016-06-21
Peter Amstutz
8442: Make work_api parameter to ArvCwlRunner construct...
tree
|
commitdiff
2016-06-21
Peter Amstutz
8442: Bugfixes from end-to-end testing.
tree
|
commitdiff
2016-06-21
Peter Amstutz
8442: Fix tests. Update comments. Rename jobs ->...
tree
|
commitdiff
2016-06-20
Peter Amstutz
8442: Rename --crunch1 and --crunch2 options to --api...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Generatefiles encode utf-8
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Submit CommandLineTool containers directly withou...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Tweak internal handling of keep: paths, examine...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: more import fixups, import workflow file correctly.
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: import fixups
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Debugging container --submit with crunch2
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Adding --submit support with --crunch2. General...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Fix message
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: raise UnsupportedRequirement for unsupported...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Setting up mount points works. Capturing output...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Return PDH for Docker container. Working on...
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Submit containers Work in progess.
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: Add --crunch1/--crunch2 switch
tree
|
commitdiff
2016-06-15
Peter Amstutz
8442: CWL create crunch2 containers WIP
tree
|
commitdiff
2016-06-08
radhika
Merge branch 'master' into 8650-container-work-unit
tree
|
commitdiff
next