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13200: test assigning __version__
[arvados.git]
/
sdk
/
cwl
/
2017-02-13
Peter Amstutz
Merge branch '9397-cwl-initialworkdir-crunchv2' closes...
tree
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commitdiff
2017-02-13
Peter Amstutz
9397: Improve container InitialWorkDir test.
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commitdiff
2017-02-13
Peter Amstutz
9397: Fix keep URI splitting. Fix error when container...
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commitdiff
2017-02-13
Peter Amstutz
9397: arvados-cwl-runner implementation of InitialWorkD...
tree
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commitdiff
2017-02-13
Peter Amstutz
Update schema-salad pin. refs #10993
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commitdiff
2017-02-13
Peter Amstutz
Update cwltool pin. closes #10993
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commitdiff
2017-02-13
Peter Amstutz
Merge branch '9397-prepopulate-output-directory' refs...
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commitdiff
2017-02-13
Peter Amstutz
Merge branch '10846-nodemanager-errors' closes #10846
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commitdiff
2017-02-10
Tom Clegg
Merge branch '11088-keep-cache-units'
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commitdiff
2017-02-10
Tom Clegg
Merge branch '11070-ws-listener-problem'
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commitdiff
2017-02-10
radhika
closes #10903
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commitdiff
2017-02-10
Tom Clegg
11088: Fix keep_cache_ram units.
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commitdiff
2017-02-10
Lucas Di Pentima
Merge branch '10956-arvput-pdh-fix'
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commitdiff
2017-02-09
Lucas Di Pentima
10956: Fixed cwl test mocks to match behaviour change...
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commitdiff
2017-02-03
Tom Clegg
Merge branch 'master' into 10797-ruby-2.3
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commitdiff
2017-01-31
Tom Clegg
Merge branch '10700-dispatch'
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commitdiff
2017-01-30
Lucas Di Pentima
10813: Merge branch 'master' into 10813-arv-put-six...
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commitdiff
2017-01-30
radhika
Merge branch 'master' into 9397-prepopulate-output...
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commitdiff
2017-01-26
Peter Amstutz
Bump schema-salad version for schema loading performanc...
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commitdiff
2017-01-25
Peter Amstutz
arv_docker_get_image should not modify dockerRequiremen...
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commitdiff
2017-01-25
Peter Amstutz
Merge branch '10812-docker-upload-fix' refs #10812
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commitdiff
2017-01-25
Peter Amstutz
10812: Fix bug and add test that docker dependencies...
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commitdiff
2017-01-25
Peter Amstutz
Merge branch '10895-run-in-single-container-reuse'...
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commitdiff
2017-01-25
Peter Amstutz
10895: Don't report "reused" for Failed/Cancelled conta...
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commitdiff
2017-01-23
Peter Amstutz
10895: Don't add uploaded files to pathmap if they...
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commitdiff
2017-01-23
Peter Amstutz
10895: Improve reuse for RunInSingleContainer jobs
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commitdiff
2017-01-23
Tom Clegg
Merge branch 'master' into 9998-no-count-items-available
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commitdiff
2017-01-23
Peter Amstutz
Merge branch '10812-cwl-separate-dependencies' refs...
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle expected NotFoundError error when checkin...
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commitdiff
2017-01-23
Peter Amstutz
10812: Add num_retries to CollectionFetcher and collect...
tree
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commitdiff
2017-01-23
Peter Amstutz
10812: Fix indentation typo.
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commitdiff
2017-01-23
Peter Amstutz
10812: Update cwltool and schema-salad dependencies.
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle $schema references.
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commitdiff
2017-01-23
Peter Amstutz
10812: Don't use cStringIO which doesn't like unicode...
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commitdiff
2017-01-23
Peter Amstutz
10812: Check for dockerOutputDirectory and raise Unsupp...
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commitdiff
2017-01-23
Peter Amstutz
10812: Fix imports, reference #main in cwl:tool
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commitdiff
2017-01-23
Peter Amstutz
10812: Improve check that already packed workflow colle...
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commitdiff
2017-01-23
Peter Amstutz
10812: Don't try to upload embedded tools separately...
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle workflow keep references.
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commitdiff
2017-01-23
Peter Amstutz
10812: Use packed workflows for all run modes.
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commitdiff
2017-01-23
Peter Amstutz
Merge branch '10812-log-merge' refs #10812
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commitdiff
2017-01-23
Peter Amstutz
Merge branch '10812-submit-runner-image' refs #10812
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commitdiff
2017-01-20
Peter Amstutz
10812: Add tests
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commitdiff
2017-01-20
Peter Amstutz
10812: Perform merge of logs based on timestamp instead...
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commitdiff
2017-01-20
Peter Amstutz
10812: Add --submit-runner-image to override default...
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commitdiff
2017-01-19
Tom Clegg
Merge branch 'master' into 9998-no-count-items-available
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commitdiff
2017-01-18
Lucas Di Pentima
10813: Merge branch 'master' into 10813-arv-put-six...
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commitdiff
2017-01-18
Peter Amstutz
Merge branch '10292-cwl-deadlock' refs #10292
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commitdiff
2017-01-18
Peter Amstutz
10292: Update cwltool for bugfix: intermittant workflow...
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commitdiff
2017-01-16
Tom Clegg
Merge branch 'master' into 9998-no-count-items-available
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commitdiff
2017-01-14
Ward Vandewege
Merge branch 'master' into 10858-build-packages-improve...
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commitdiff
2017-01-06
Peter Amstutz
Merge branch '10793-cwl-continue-on-error' closes ...
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commitdiff
2017-01-06
Peter Amstutz
10793: Ensure on_error is set if not present in job_ord...
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commitdiff
2017-01-05
Lucas Di Pentima
Merge branch '10223-cr-set-output-name'
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commitdiff
2017-01-05
Peter Amstutz
10793: Fix to return tuple for alternate exit points...
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commitdiff
2017-01-05
Peter Amstutz
10793: Move output_callback to finally block to ensure...
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commitdiff
2017-01-05
Peter Amstutz
10793: Return output, status tuple from executor.
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commitdiff
2017-01-05
Peter Amstutz
10793: Bump cwltool pin for workflow engine improvement...
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commitdiff
2017-01-04
Lucas Di Pentima
10223: Merge branch 'master' into 10223-cr-set-output...
tree
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commitdiff
2017-01-04
Lucas Di Pentima
10223: Added support to CR output_name on cwl-runner...
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commitdiff
2017-01-12
Peter Amstutz
Merge branch '10812-cwl-package-update' refs #10812
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commitdiff
2017-01-12
Peter Amstutz
10812: Update arvados-cwl-runner dependencies. Remove...
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commitdiff
2017-01-12
Tom Clegg
Merge branch '9831-faster-unique-name'
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commitdiff
2017-01-12
Peter Amstutz
Merge branch '10869-cwl-keep-ref' refs #10869
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commitdiff
2017-01-12
Peter Amstutz
10869: Pass CollectionFetcher to load_tool in crunch_sc...
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commitdiff
2017-01-12
Tom Clegg
Merge branch 'master' into 9998-unsigned_manifest
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commitdiff
2016-12-31
Ward Vandewege
Merge branch 'master' into 10786-remove-centos6-from...
tree
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commitdiff
2016-12-30
Tom Clegg
Merge branch '10467-client-disconnect' closes #10467
tree
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commitdiff
2016-12-30
Tom Clegg
Merge branch '10538-trash-delete' closes #10538
tree
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commitdiff
2016-12-30
Peter Amstutz
Merge branch '10497-cwl-job-logs' closes #10497
tree
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commitdiff
2016-12-30
Peter Amstutz
Merge branch '10722-cwl-subworkflow' closes #10722
tree
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commitdiff
2016-12-30
Peter Amstutz
10497: Replace \d\d\d\d with \d{4}
tree
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commitdiff
2016-12-28
Peter Amstutz
10722: Issue better error when 'id' is missing.
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Add logname (crunch-run, stdout, stderr) to...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Filter crunchstat lines to make more space for...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Increase number of log lines shown by runner...
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commitdiff
2016-12-28
Peter Amstutz
10497: Don't prefix every line of log from job.
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Add --no-log-timestamps to eliminate redundant...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Print last 25 lines of log when job fails.
tree
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commitdiff
2016-12-28
Peter Amstutz
Fix crunch script to construct toolpath before it is...
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commitdiff
2016-12-28
Peter Amstutz
Merge branch '10497-cwl-better-errors' refs #10497
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Pop cwl:tool parameter from job order
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Update ruamel.yaml, schema salad, and cwltool
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Use SourceLine in context manager in PathMapper...
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commitdiff
2016-12-28
Peter Amstutz
10497: Improve up front feature checking and error...
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commitdiff
2016-12-28
Peter Amstutz
10497: Add source line reporting to errors and fix...
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commitdiff
2016-12-28
Peter Amstutz
10497: Update cwltool & schema salad versions.
tree
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commitdiff
2016-12-22
Tom Clegg
Merge branch '10585-crunchstat-lost-parent' refs #10585
tree
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commitdiff
2016-12-21
Lucas Di Pentima
10671: Merge branch 'master' into 10671-pipeline-instan...
tree
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commitdiff
2016-12-21
Tom Clegg
10467: Merge branch 'master' into 10467-client-disconnect
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commitdiff
2016-12-19
Lucas Di Pentima
10671: Merge branch 'master' into 10671-pipeline-instan...
tree
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commitdiff
2016-12-19
Peter Amstutz
Fix CWL tests affected by minimum_script_version tweaks...
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commitdiff
2016-12-19
Peter Amstutz
Adjust arvados repo minimum script versions for job...
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commitdiff
2016-12-19
Peter Amstutz
Fix crunch_script.py to pass name arg, refs #10681
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commitdiff
2016-12-16
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
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commitdiff
2016-12-16
Peter Amstutz
Merge branch '10684-crunch-run-ca-certs' closes #10684
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commitdiff
2016-12-16
Peter Amstutz
Fix CWL tests refs #10576
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commitdiff
2016-12-15
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
tree
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commitdiff
2016-12-15
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
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commitdiff
2016-12-15
Peter Amstutz
Bump schema-salad version to fix rdflib-jsonld dependen...
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