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Merge branch '8567-docker-migrator' refs #8567
[arvados.git]
/
sdk
/
cwl
/
arvados_cwl
/
2017-03-20
Peter Amstutz
Merge branch '8567-docker-migrator' refs #8567
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commitdiff
2017-03-14
radhika
closes #11071
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commitdiff
2017-03-14
Peter Amstutz
Merge branch '8567-api-select-docker-fmt' refs #8567
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commitdiff
2017-03-14
Peter Amstutz
Merge branch '8567-cwl-docker-img' refs #8567
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commitdiff
2017-03-14
Peter Amstutz
8567: Use Docker image repo+tag name instead of PDH...
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commitdiff
2017-02-28
radhika
Merge branch 'master' into 11015-crunch-run-output...
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commitdiff
2017-02-27
Lucas Di Pentima
11002: Merge branch 'master' into 11002-arvput-crash-fix
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commitdiff
2017-02-24
Tom Clegg
Merge branch '6347-log-timestamps'
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commitdiff
2017-02-24
Peter Amstutz
Merge branch '10629-fuse-listing-perf' closes #10629
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commitdiff
2017-02-24
Peter Amstutz
Merge branch '9277-container-output' closes #9277
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commitdiff
2017-02-24
Peter Amstutz
9277: arvados-cwl-runner sets "is_trashed" when directl...
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commitdiff
2017-02-21
Lucas Di Pentima
11002: Merge branch 'master' into 11002-arvput-crash-fix
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commitdiff
2017-02-20
Tom Clegg
11097: Merge branch 'master' into 11097-reuse-impure
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commitdiff
2017-02-16
Tom Clegg
Merge branch '11017-docker-migration'
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commitdiff
2017-02-15
Tom Clegg
10797: Merge branch 'master' into 10797-ruby-2.3
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commitdiff
2017-02-14
Tom Clegg
Merge branch '10701-refactor-dispatch'
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commitdiff
2017-02-13
Peter Amstutz
Merge branch '9397-cwl-initialworkdir-crunchv2' closes...
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commitdiff
2017-02-13
Peter Amstutz
9397: Fix keep URI splitting. Fix error when container...
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commitdiff
2017-02-13
Peter Amstutz
9397: arvados-cwl-runner implementation of InitialWorkD...
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commitdiff
2017-02-13
Peter Amstutz
Merge branch '9397-prepopulate-output-directory' refs...
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commitdiff
2017-02-13
Peter Amstutz
Merge branch '10846-nodemanager-errors' closes #10846
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2017-02-10
Tom Clegg
Merge branch '11088-keep-cache-units'
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commitdiff
2017-02-10
Tom Clegg
11088: Fix keep_cache_ram units.
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commitdiff
2017-02-03
Tom Clegg
Merge branch 'master' into 10797-ruby-2.3
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commitdiff
2017-01-31
Tom Clegg
Merge branch '10700-dispatch'
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commitdiff
2017-01-30
Lucas Di Pentima
10813: Merge branch 'master' into 10813-arv-put-six...
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commitdiff
2017-01-30
radhika
Merge branch 'master' into 9397-prepopulate-output...
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commitdiff
2017-01-25
Peter Amstutz
arv_docker_get_image should not modify dockerRequiremen...
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commitdiff
2017-01-25
Peter Amstutz
Merge branch '10812-docker-upload-fix' refs #10812
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commitdiff
2017-01-25
Peter Amstutz
10812: Fix bug and add test that docker dependencies...
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2017-01-25
Peter Amstutz
Merge branch '10895-run-in-single-container-reuse'...
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commitdiff
2017-01-25
Peter Amstutz
10895: Don't report "reused" for Failed/Cancelled conta...
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commitdiff
2017-01-23
Peter Amstutz
10895: Don't add uploaded files to pathmap if they...
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commitdiff
2017-01-23
Peter Amstutz
10895: Improve reuse for RunInSingleContainer jobs
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2017-01-23
Tom Clegg
Merge branch 'master' into 9998-no-count-items-available
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commitdiff
2017-01-23
Peter Amstutz
Merge branch '10812-cwl-separate-dependencies' refs...
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle expected NotFoundError error when checkin...
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commitdiff
2017-01-23
Peter Amstutz
10812: Add num_retries to CollectionFetcher and collect...
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commitdiff
2017-01-23
Peter Amstutz
10812: Fix indentation typo.
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle $schema references.
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commitdiff
2017-01-23
Peter Amstutz
10812: Don't use cStringIO which doesn't like unicode...
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commitdiff
2017-01-23
Peter Amstutz
10812: Check for dockerOutputDirectory and raise Unsupp...
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commitdiff
2017-01-23
Peter Amstutz
10812: Fix imports, reference #main in cwl:tool
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commitdiff
2017-01-23
Peter Amstutz
10812: Improve check that already packed workflow colle...
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2017-01-23
Peter Amstutz
10812: Don't try to upload embedded tools separately...
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commitdiff
2017-01-23
Peter Amstutz
10812: Handle workflow keep references.
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commitdiff
2017-01-23
Peter Amstutz
10812: Use packed workflows for all run modes.
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2017-01-23
Peter Amstutz
Merge branch '10812-log-merge' refs #10812
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2017-01-23
Peter Amstutz
Merge branch '10812-submit-runner-image' refs #10812
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2017-01-20
Peter Amstutz
10812: Add tests
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2017-01-20
Peter Amstutz
10812: Perform merge of logs based on timestamp instead...
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commitdiff
2017-01-20
Peter Amstutz
10812: Add --submit-runner-image to override default...
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2017-01-16
Tom Clegg
Merge branch 'master' into 9998-no-count-items-available
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2017-01-14
Ward Vandewege
Merge branch 'master' into 10858-build-packages-improve...
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2017-01-06
Peter Amstutz
Merge branch '10793-cwl-continue-on-error' closes ...
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commitdiff
2017-01-06
Peter Amstutz
10793: Ensure on_error is set if not present in job_ord...
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commitdiff
2017-01-05
Lucas Di Pentima
Merge branch '10223-cr-set-output-name'
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commitdiff
2017-01-05
Peter Amstutz
10793: Fix to return tuple for alternate exit points...
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commitdiff
2017-01-05
Peter Amstutz
10793: Move output_callback to finally block to ensure...
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commitdiff
2017-01-05
Peter Amstutz
10793: Return output, status tuple from executor.
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commitdiff
2017-01-05
Peter Amstutz
10793: Bump cwltool pin for workflow engine improvement...
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2017-01-04
Lucas Di Pentima
10223: Merge branch 'master' into 10223-cr-set-output...
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2017-01-04
Lucas Di Pentima
10223: Added support to CR output_name on cwl-runner...
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2017-01-12
Peter Amstutz
Merge branch '10812-cwl-package-update' refs #10812
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2017-01-12
Tom Clegg
Merge branch '9831-faster-unique-name'
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2017-01-12
Peter Amstutz
Merge branch '10869-cwl-keep-ref' refs #10869
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2017-01-12
Peter Amstutz
10869: Pass CollectionFetcher to load_tool in crunch_sc...
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commitdiff
2017-01-12
Tom Clegg
Merge branch 'master' into 9998-unsigned_manifest
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2016-12-31
Ward Vandewege
Merge branch 'master' into 10786-remove-centos6-from...
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commitdiff
2016-12-30
Tom Clegg
Merge branch '10467-client-disconnect' closes #10467
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2016-12-30
Tom Clegg
Merge branch '10538-trash-delete' closes #10538
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2016-12-30
Peter Amstutz
Merge branch '10497-cwl-job-logs' closes #10497
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2016-12-30
Peter Amstutz
Merge branch '10722-cwl-subworkflow' closes #10722
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commitdiff
2016-12-30
Peter Amstutz
10497: Replace \d\d\d\d with \d{4}
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commitdiff
2016-12-28
Peter Amstutz
10722: Issue better error when 'id' is missing.
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commitdiff
2016-12-28
Peter Amstutz
10497: Add logname (crunch-run, stdout, stderr) to...
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commitdiff
2016-12-28
Peter Amstutz
10497: Filter crunchstat lines to make more space for...
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commitdiff
2016-12-28
Peter Amstutz
10497: Increase number of log lines shown by runner...
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commitdiff
2016-12-28
Peter Amstutz
10497: Don't prefix every line of log from job.
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commitdiff
2016-12-28
Peter Amstutz
10497: Add --no-log-timestamps to eliminate redundant...
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commitdiff
2016-12-28
Peter Amstutz
10497: Print last 25 lines of log when job fails.
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commitdiff
2016-12-28
Peter Amstutz
Fix crunch script to construct toolpath before it is...
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commitdiff
2016-12-28
Peter Amstutz
Merge branch '10497-cwl-better-errors' refs #10497
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commitdiff
2016-12-28
Peter Amstutz
10497: Pop cwl:tool parameter from job order
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commitdiff
2016-12-28
Peter Amstutz
10497: Use SourceLine in context manager in PathMapper...
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commitdiff
2016-12-28
Peter Amstutz
10497: Improve up front feature checking and error...
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commitdiff
2016-12-28
Peter Amstutz
10497: Add source line reporting to errors and fix...
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commitdiff
2016-12-22
Tom Clegg
Merge branch '10585-crunchstat-lost-parent' refs #10585
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commitdiff
2016-12-21
Lucas Di Pentima
10671: Merge branch 'master' into 10671-pipeline-instan...
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commitdiff
2016-12-21
Tom Clegg
10467: Merge branch 'master' into 10467-client-disconnect
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commitdiff
2016-12-19
Peter Amstutz
Fix CWL tests affected by minimum_script_version tweaks...
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commitdiff
2016-12-19
Peter Amstutz
Adjust arvados repo minimum script versions for job...
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commitdiff
2016-12-19
Peter Amstutz
Fix crunch_script.py to pass name arg, refs #10681
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commitdiff
2016-12-15
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
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commitdiff
2016-12-15
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
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commitdiff
2016-12-14
Peter Amstutz
Merge branch '10576-cwl-keep-fetcher' closes #10576
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2016-12-13
Peter Amstutz
Merge branch 'master' into 10576-cwl-keep-fetcher
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commitdiff
2016-12-13
Peter Amstutz
10576: Add ability to run pipeline templates containing...
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commitdiff
2016-12-13
Peter Amstutz
10576: Add retries to arvcontainer. Add command line...
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commitdiff
2016-12-11
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
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