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9308: Set task.keepTmpOutput: true when outputDirType is keep_output_dir.
[arvados.git]
/
sdk
/
cwl
/
arvados_cwl
/
2016-10-05
Peter Amstutz
9308: Set task.keepTmpOutput: true when outputDirType...
tree
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commitdiff
2016-10-04
Peter Amstutz
Merge branch '9001-summary-skip-malformed-lines' closes...
tree
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commitdiff
2016-09-30
Peter Amstutz
Merge branch '9857-cwl-acceptlist-re' refs #9857
tree
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commitdiff
2016-09-30
Peter Amstutz
Merge branch '10032-cwl-spinup' refs #10032
tree
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commitdiff
2016-09-30
Peter Amstutz
Drill down on metrics on job submission.
tree
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commitdiff
2016-09-29
Peter Amstutz
10032: Add more metrics
tree
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commitdiff
2016-09-27
Peter Amstutz
Merge branch '10129-cwl-remove-listing' closes #10129
tree
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commitdiff
2016-09-27
Peter Amstutz
10129: Rename del_listing to trim_listing and add docst...
tree
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commitdiff
2016-09-27
Peter Amstutz
10129: Ensure that directory literals get preserved...
tree
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commitdiff
2016-09-27
Peter Amstutz
Fix #10133, use "resolved" (keep reference) instead...
tree
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commitdiff
2016-09-27
Peter Amstutz
10129: Trim listing from Directory objects that are...
tree
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commitdiff
2016-09-26
radhika
closes #9514
tree
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commitdiff
2016-09-26
Peter Amstutz
Merge branch '9988-cwl-arv-hints' closes #9988
tree
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commitdiff
2016-09-26
Peter Amstutz
Fix typo.
tree
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commitdiff
2016-09-26
radhika
refs #10028
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commitdiff
2016-09-26
Peter Amstutz
Merge branch '10081-cwl-run-same-job' closes #10081
tree
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commitdiff
2016-09-23
Peter Amstutz
Merge branch '10081-cwl-run-same-job' into 9988-cwl...
tree
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commitdiff
2016-09-23
Peter Amstutz
Merge branch 'master' into 10081-cwl-run-same-job
tree
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commitdiff
2016-09-23
Peter Amstutz
Merge branch '10088-cwl-dedup-deps' refs #10088
tree
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commitdiff
2016-09-23
Peter Amstutz
10081: Change logical identifier for Arvados schema...
tree
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commitdiff
2016-09-23
Peter Amstutz
10088: Updated cwltool deduplicates dependencies to...
tree
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commitdiff
2016-09-23
radhika
Merge branch 'master' into 9514-only-delete-old-contain...
tree
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commitdiff
2016-09-22
Lucas Di Pentima
10037: Merge branch 'master' into 10037-useless-progres...
tree
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commitdiff
2016-09-22
Peter Amstutz
9988: Add arvados-specfic hints RuntimeConstraints...
tree
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commitdiff
2016-09-22
Peter Amstutz
10081: Rename cwl.input.json to cwl.input.yml, fix...
tree
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commitdiff
2016-09-22
Peter Amstutz
Merge branch 'master' into 10081-cwl-run-same-job
tree
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commitdiff
2016-09-21
Lucas Di Pentima
10029: Merge branch 'master' into 10029-wb-send-request-id
tree
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commitdiff
2016-09-20
Peter Amstutz
Merge branch '10088-raw-files' refs #10088
tree
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commitdiff
2016-09-20
Peter Amstutz
10081: Upload dependencies. Fix keep paths. Ensure...
tree
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commitdiff
2016-09-19
Peter Amstutz
10081: Fix quoting issue with workflow & input object...
tree
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commitdiff
2016-09-19
Peter Amstutz
10081: Dump as yaml instead of json. Add test for...
tree
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commitdiff
2016-09-19
Tom Clegg
Merge branch '9954-keep-balance-systemd' closes #9954
tree
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commitdiff
2016-09-19
Peter Amstutz
Merge branch '10088-raw-files' into 10081-cwl-run-same-job
tree
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commitdiff
2016-09-19
Peter Amstutz
10088: Bump cwltool dependency for another bugfix to...
tree
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commitdiff
2016-09-16
Peter Amstutz
10088: upload_dependencies reads raw files to find...
tree
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commitdiff
2016-09-16
Peter Amstutz
10081: Fix RunInSingleContainer test
tree
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commitdiff
2016-09-16
Peter Amstutz
10081: Custom extension of v1.0 schema to recognize...
tree
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commitdiff
2016-09-16
Peter Amstutz
10081: Add test for recursively calling cwltool when...
tree
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commitdiff
2016-09-15
Peter Amstutz
10081: Quote expression interpolations. Set hints...
tree
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commitdiff
2016-09-15
Peter Amstutz
10081: Submitting whole workflows as jobs WIP
tree
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commitdiff
2016-09-15
Peter Amstutz
Fix arvados-cwl-runner tests, refs #9766
tree
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commitdiff
2016-09-15
Peter Amstutz
Fix misake in arvados-cwl-runner upload_dependencies...
tree
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commitdiff
2016-09-14
Peter Amstutz
Merge branch '100032-cwl-metrics' refs #100032
tree
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commitdiff
2016-09-14
Peter Amstutz
100032: Add metrics to job submission in --debug mode.
tree
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commitdiff
2016-09-14
Peter Amstutz
Merge branch '9766-register-workflow' closes #9766
tree
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commitdiff
2016-09-14
Peter Amstutz
9766: Rename metavar. Post packed yaml text instead...
tree
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commitdiff
2016-09-14
Peter Amstutz
Merge branch 'master' into 9766-register-workflow
tree
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commitdiff
2016-09-13
radhika
Merge branch 'master' into 9835-container-api-doc
tree
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commitdiff
2016-09-13
Lucas Di Pentima
Merge branch 'master' into 9623-reuse-containers
tree
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commitdiff
2016-09-08
Peter Amstutz
Merge branch 'master' into 9766-register-workflow
tree
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commitdiff
2016-09-08
radhika
Merge branch 'master' into 9898-container-lock-api
tree
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commitdiff
2016-09-07
Peter Amstutz
Don't pass work_api twice in ArvadosCommandTool constru...
tree
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commitdiff
2016-09-06
Peter Amstutz
Merge branch 'master' into 9766-register-workflow
tree
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commitdiff
2016-09-05
Tom Clegg
9799: Merge branch 'master' into 9799-nonadmin-logs
tree
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commitdiff
2016-09-05
Lucas Di Pentima
Merge branch '9858-selenium-locking-port-binding'
tree
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commitdiff
2016-09-02
Peter Amstutz
9857: Allow any character in filenames.
tree
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commitdiff
2016-09-02
Peter Amstutz
Merge branch '9923-cwl-collection-dir' refs #9923
tree
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commitdiff
2016-09-01
Peter Amstutz
9923: Fix instanceof() to check correct base class
tree
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commitdiff
2016-08-30
radhika
closes #9824
tree
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commitdiff
2016-08-30
radhika
closes #9767
tree
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commitdiff
2016-08-30
Lucas Di Pentima
Merge branch '9687-container-request-display'
tree
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commitdiff
2016-08-30
Peter Amstutz
Merge branch '8232-docker-remove-obsolete' closes ...
tree
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commitdiff
2016-08-30
Peter Amstutz
Merge branch 'master' into 9766-register-workflow
tree
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commitdiff
2016-08-30
Peter Amstutz
Merge branch '9783-cwl-error-invalid-dir' closes #9783
tree
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commitdiff
2016-08-30
Peter Amstutz
9766: Fix make_workflow to not modify input object...
tree
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commitdiff
2016-08-30
Peter Amstutz
9766: Add test for workflow create.
tree
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commitdiff
2016-08-29
Peter Amstutz
9766: Full workflow: create workflow using command...
tree
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commitdiff
2016-08-29
Peter Amstutz
9766: Supports packing workflow, setting defaults,...
tree
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commitdiff
2016-08-25
Tom Clegg
Merge branch '9705-crunch2-install-guide-wip'
tree
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commitdiff
2016-08-19
Peter Amstutz
Merge branch '9820-cwl-poll-jobs' closes #9820
tree
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commitdiff
2016-08-19
Peter Amstutz
9820: Directly poll job or container records that we...
tree
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commitdiff
2016-08-19
Tom Clegg
Merge branch '9684-workflows'
tree
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commitdiff
2016-08-18
Lucas Di Pentima
Merge branch 'master' into 9333-api-server-invalid-sql
tree
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commitdiff
2016-08-18
radhika
closes #9684
tree
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commitdiff
2016-08-17
Lucas Di Pentima
Merge branch '9333-api-server-invalid-sql'
tree
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commitdiff
2016-08-16
Peter Amstutz
9783: Report useful error if subdirectory of a collecti...
tree
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commitdiff
2016-08-15
radhika
closes #9709
tree
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commitdiff
2016-08-11
Peter Amstutz
Fix failing tests. refs #9776
tree
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commitdiff
2016-08-11
Peter Amstutz
Merge branch '9776-cwl-HOME-TMPDIR' closes #9776
tree
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commitdiff
2016-08-11
Peter Amstutz
9776: Ensure that $HOME and $TMPDIR are set correctly.
tree
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commitdiff
2016-08-11
Peter Amstutz
Merge branch '9615-cwl-writable-unsupported' refs ...
tree
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commitdiff
2016-08-11
Peter Amstutz
9615: Add check_writable to check for "writable" field...
tree
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commitdiff
2016-08-11
Peter Amstutz
Merge branch '9751-cwl-keep-dir' closes #9751
tree
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commitdiff
2016-08-11
Peter Amstutz
9552: import compute_checksums from cwltool.
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Fix handling local Directories
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Fix unit tests. Rename dir6.cwl to keep-dir...
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Override realpath in CollectionFsAccess
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Fix direct to keep directory references.
tree
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commitdiff
2016-08-11
Peter Amstutz
9751: Provide make_fs_access=CollectionFsAccess and...
tree
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commitdiff
2016-08-11
radhika
closes #9678
tree
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commitdiff
2016-08-11
radhika
closes #9658
tree
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commitdiff
2016-08-10
radhika
9658: when arvados-cwl-runner is invoked with --api...
tree
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commitdiff
2016-08-04
Peter Amstutz
Merge branch '9552-compute-checksum-final-output' refs...
tree
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commitdiff
2016-08-04
Tom Clegg
Merge branch '9406-cgroup-parent'
tree
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commitdiff
2016-08-04
Peter Amstutz
9552: If compute_checksum is true, check if checksum...
tree
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commitdiff
2016-08-04
Ward Vandewege
Merge branch '9677-update-install-docs'
tree
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commitdiff
2016-08-03
Peter Amstutz
Merge branch '9674-cwl-initialworkdir' closes #9674
tree
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commitdiff
2016-08-02
Peter Amstutz
9674: InitialWorkDirPathMapper bug fix to set correct...
tree
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commitdiff
2016-07-28
radhika
refs #9552
tree
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commitdiff
2016-07-28
radhika
9552: add compute-checksum flag to arvados-cwl-runner
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