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Merge branch '11017-docker-migration'
[arvados.git] / sdk / cwl /
2017-02-16 Tom CleggMerge branch '11017-docker-migration' tree | commitdiff
2017-02-15 Tom Clegg10797: Merge branch 'master' into 10797-ruby-2.3 tree | commitdiff
2017-02-14 Peter AmstutzMerge branch 'arvbox-docker-imgfmt' no issue # tree | commitdiff
2017-02-14 Peter AmstutzUpdate test_with_arvbox script. tree | commitdiff
2017-02-14 Tom CleggMerge branch '10701-refactor-dispatch' tree | commitdiff
2017-02-13 Peter AmstutzMerge branch '9397-cwl-initialworkdir-crunchv2' closes... tree | commitdiff
2017-02-13 Peter Amstutz9397: Improve container InitialWorkDir test. tree | commitdiff
2017-02-13 Peter Amstutz9397: Fix keep URI splitting. Fix error when container... tree | commitdiff
2017-02-13 Peter Amstutz9397: arvados-cwl-runner implementation of InitialWorkD... tree | commitdiff
2017-02-13 Peter AmstutzUpdate schema-salad pin. refs #10993 tree | commitdiff
2017-02-13 Peter AmstutzUpdate cwltool pin. closes #10993 tree | commitdiff
2017-02-13 Peter AmstutzMerge branch '9397-prepopulate-output-directory' refs... tree | commitdiff
2017-02-13 Peter AmstutzMerge branch '10846-nodemanager-errors' closes #10846 tree | commitdiff
2017-02-10 Tom CleggMerge branch '11088-keep-cache-units' tree | commitdiff
2017-02-10 Tom CleggMerge branch '11070-ws-listener-problem' tree | commitdiff
2017-02-10 radhikacloses #10903 tree | commitdiff
2017-02-10 Tom Clegg11088: Fix keep_cache_ram units. tree | commitdiff
2017-02-10 Lucas Di PentimaMerge branch '10956-arvput-pdh-fix' tree | commitdiff
2017-02-09 Lucas Di Pentima10956: Fixed cwl test mocks to match behaviour change... tree | commitdiff
2017-02-03 Tom CleggMerge branch 'master' into 10797-ruby-2.3 tree | commitdiff
2017-01-31 Tom CleggMerge branch '10700-dispatch' tree | commitdiff
2017-01-30 Lucas Di Pentima10813: Merge branch 'master' into 10813-arv-put-six... tree | commitdiff
2017-01-30 radhikaMerge branch 'master' into 9397-prepopulate-output... tree | commitdiff
2017-01-26 Peter AmstutzBump schema-salad version for schema loading performanc... tree | commitdiff
2017-01-25 Peter Amstutzarv_docker_get_image should not modify dockerRequiremen... tree | commitdiff
2017-01-25 Peter AmstutzMerge branch '10812-docker-upload-fix' refs #10812 tree | commitdiff
2017-01-25 Peter Amstutz10812: Fix bug and add test that docker dependencies... tree | commitdiff
2017-01-25 Peter AmstutzMerge branch '10895-run-in-single-container-reuse'... tree | commitdiff
2017-01-25 Peter Amstutz10895: Don't report "reused" for Failed/Cancelled conta... tree | commitdiff
2017-01-23 Peter Amstutz10895: Don't add uploaded files to pathmap if they... tree | commitdiff
2017-01-23 Peter Amstutz10895: Improve reuse for RunInSingleContainer jobs tree | commitdiff
2017-01-23 Tom CleggMerge branch 'master' into 9998-no-count-items-available tree | commitdiff
2017-01-23 Peter AmstutzMerge branch '10812-cwl-separate-dependencies' refs... tree | commitdiff
2017-01-23 Peter Amstutz10812: Handle expected NotFoundError error when checkin... tree | commitdiff
2017-01-23 Peter Amstutz10812: Add num_retries to CollectionFetcher and collect... tree | commitdiff
2017-01-23 Peter Amstutz10812: Fix indentation typo. tree | commitdiff
2017-01-23 Peter Amstutz10812: Update cwltool and schema-salad dependencies. tree | commitdiff
2017-01-23 Peter Amstutz10812: Handle $schema references. tree | commitdiff
2017-01-23 Peter Amstutz10812: Don't use cStringIO which doesn't like unicode... tree | commitdiff
2017-01-23 Peter Amstutz10812: Check for dockerOutputDirectory and raise Unsupp... tree | commitdiff
2017-01-23 Peter Amstutz10812: Fix imports, reference #main in cwl:tool tree | commitdiff
2017-01-23 Peter Amstutz10812: Improve check that already packed workflow colle... tree | commitdiff
2017-01-23 Peter Amstutz10812: Don't try to upload embedded tools separately... tree | commitdiff
2017-01-23 Peter Amstutz10812: Handle workflow keep references. tree | commitdiff
2017-01-23 Peter Amstutz10812: Use packed workflows for all run modes. tree | commitdiff
2017-01-23 Peter AmstutzMerge branch '10812-log-merge' refs #10812 tree | commitdiff
2017-01-23 Peter AmstutzMerge branch '10812-submit-runner-image' refs #10812 tree | commitdiff
2017-01-20 Peter Amstutz10812: Add tests tree | commitdiff
2017-01-20 Peter Amstutz10812: Perform merge of logs based on timestamp instead... tree | commitdiff
2017-01-20 Peter Amstutz10812: Add --submit-runner-image to override default... tree | commitdiff
2017-01-19 Tom CleggMerge branch 'master' into 9998-no-count-items-available tree | commitdiff
2017-01-18 Lucas Di Pentima10813: Merge branch 'master' into 10813-arv-put-six... tree | commitdiff
2017-01-18 Peter AmstutzMerge branch '10292-cwl-deadlock' refs #10292 tree | commitdiff
2017-01-18 Peter Amstutz10292: Update cwltool for bugfix: intermittant workflow... tree | commitdiff
2017-01-16 Tom CleggMerge branch 'master' into 9998-no-count-items-available tree | commitdiff
2017-01-14 Ward VandewegeMerge branch 'master' into 10858-build-packages-improve... tree | commitdiff
2017-01-06 Peter AmstutzMerge branch '10793-cwl-continue-on-error' closes ... tree | commitdiff
2017-01-06 Peter Amstutz10793: Ensure on_error is set if not present in job_ord... tree | commitdiff
2017-01-05 Lucas Di PentimaMerge branch '10223-cr-set-output-name' tree | commitdiff
2017-01-05 Peter Amstutz10793: Fix to return tuple for alternate exit points... tree | commitdiff
2017-01-05 Peter Amstutz10793: Move output_callback to finally block to ensure... tree | commitdiff
2017-01-05 Peter Amstutz10793: Return output, status tuple from executor. tree | commitdiff
2017-01-05 Peter Amstutz10793: Bump cwltool pin for workflow engine improvement... tree | commitdiff
2017-01-04 Lucas Di Pentima10223: Merge branch 'master' into 10223-cr-set-output... tree | commitdiff
2017-01-04 Lucas Di Pentima10223: Added support to CR output_name on cwl-runner... tree | commitdiff
2017-01-12 Peter AmstutzMerge branch '10812-cwl-package-update' refs #10812 tree | commitdiff
2017-01-12 Peter Amstutz10812: Update arvados-cwl-runner dependencies. Remove... tree | commitdiff
2017-01-12 Tom CleggMerge branch '9831-faster-unique-name' tree | commitdiff
2017-01-12 Peter AmstutzMerge branch '10869-cwl-keep-ref' refs #10869 tree | commitdiff
2017-01-12 Peter Amstutz10869: Pass CollectionFetcher to load_tool in crunch_sc... tree | commitdiff
2017-01-12 Tom CleggMerge branch 'master' into 9998-unsigned_manifest tree | commitdiff
2016-12-31 Ward VandewegeMerge branch 'master' into 10786-remove-centos6-from... tree | commitdiff
2016-12-30 Tom CleggMerge branch '10467-client-disconnect' closes #10467 tree | commitdiff
2016-12-30 Tom CleggMerge branch '10538-trash-delete' closes #10538 tree | commitdiff
2016-12-30 Peter AmstutzMerge branch '10497-cwl-job-logs' closes #10497 tree | commitdiff
2016-12-30 Peter AmstutzMerge branch '10722-cwl-subworkflow' closes #10722 tree | commitdiff
2016-12-30 Peter Amstutz10497: Replace \d\d\d\d with \d{4} tree | commitdiff
2016-12-28 Peter Amstutz10722: Issue better error when 'id' is missing. tree | commitdiff
2016-12-28 Peter Amstutz10497: Add logname (crunch-run, stdout, stderr) to... tree | commitdiff
2016-12-28 Peter Amstutz10497: Filter crunchstat lines to make more space for... tree | commitdiff
2016-12-28 Peter Amstutz10497: Increase number of log lines shown by runner... tree | commitdiff
2016-12-28 Peter Amstutz10497: Don't prefix every line of log from job. tree | commitdiff
2016-12-28 Peter Amstutz10497: Add --no-log-timestamps to eliminate redundant... tree | commitdiff
2016-12-28 Peter Amstutz10497: Print last 25 lines of log when job fails. tree | commitdiff
2016-12-28 Peter AmstutzFix crunch script to construct toolpath before it is... tree | commitdiff
2016-12-28 Peter AmstutzMerge branch '10497-cwl-better-errors' refs #10497 tree | commitdiff
2016-12-28 Peter Amstutz10497: Pop cwl:tool parameter from job order tree | commitdiff
2016-12-28 Peter Amstutz10497: Update ruamel.yaml, schema salad, and cwltool tree | commitdiff
2016-12-28 Peter Amstutz10497: Use SourceLine in context manager in PathMapper... tree | commitdiff
2016-12-28 Peter Amstutz10497: Improve up front feature checking and error... tree | commitdiff
2016-12-28 Peter Amstutz10497: Add source line reporting to errors and fix... tree | commitdiff
2016-12-28 Peter Amstutz10497: Update cwltool & schema salad versions. tree | commitdiff
2016-12-22 Tom CleggMerge branch '10585-crunchstat-lost-parent' refs #10585 tree | commitdiff
2016-12-21 Lucas Di Pentima10671: Merge branch 'master' into 10671-pipeline-instan... tree | commitdiff
2016-12-21 Tom Clegg10467: Merge branch 'master' into 10467-client-disconnect tree | commitdiff
2016-12-19 Lucas Di Pentima10671: Merge branch 'master' into 10671-pipeline-instan... tree | commitdiff
2016-12-19 Peter AmstutzFix CWL tests affected by minimum_script_version tweaks... tree | commitdiff
2016-12-19 Peter AmstutzAdjust arvados repo minimum script versions for job... tree | commitdiff
2016-12-19 Peter AmstutzFix crunch_script.py to pass name arg, refs #10681 tree | commitdiff
2016-12-16 Lucas Di Pentima10383: Merge branch 'master' into 10383-arv-put-increme... tree | commitdiff
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